Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq2340 95.1 3e-15 >seq2340 Length=6312 Score = 95.1 bits (104), Expect = 3e-15 Identities = 182/263 (69%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 10427 TATCGACCTGAACCAGCTACCCGCACCGGATGTGGTCGAGGAGCTGGACTTTGAAACCAT 10486 ||||||||| | ||||| ||||| ||| | ||||||||| || | ||||| ||| || Sbjct 1662 TATCGACCTCAGTCAGCTGCCCGCGCCGCAGGTGGTCGAGCAGATCGACTTCGAACAGAT 1603 Query 10487 TCTCGCCGAACGCAAGGCG-ACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGG 10545 |||||||| |||||||| | | | | ||| | || | || |||||| | | Sbjct 1602 CCTCGCCGAGCGCAAGGCTTATGCCG-TCAGCCTATGGCCTGCGGATGAGCAGGCCGAGA 1544 Query 10546 TCGCCCGTAC-CCTGACGCTGGAATCCGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCT 10604 ||||| | || ||| |||||| || ||||| || ||| ||||| |||| || || Sbjct 1543 TCGCC-GCACGCCTTGAGCTGGAGTCGGAGCCCATCACCAAGTTGCTGCAGGAGAACGCC 1485 Query 10605 TATCGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGGCC 10664 || || || | ||| ||||||||| || || || || | | ||||||||||| | Sbjct 1484 TACCGGGAAATGATCCTGCGTCAGCGGGTCAACGAAGCGTCGCTCGCGGTGATGCTCAGC 1425 Query 10665 TGTGCCGCCGGTAATGACCTTGA 10687 | |||| || || ||||| || Sbjct 1424 TCGGCCGGCGACAACGACCTGGA 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104461058046852