Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 5e-11 >seq6 Length=53892272 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||||||| | || ||||| || || ||| || || || || || || || | Sbjct 13065599 CCTCCTCTCAAACGTAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC-TGC 13065657 Query 43955 AATTGAC-GCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | | |||| || | ||| || || ||||| |||||||| |||||||| | || Sbjct 13065658 AAGCGTCCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGG 13065717 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| || |||||| || || | ||| ||||| | |||||| Sbjct 13065718 AATCCCTTCTTTGTCCTGAATTTTGGCCTTCACATTGTCAATGGTATCAGAACTCTCCAC 13065777 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || | ||||| || || || || | ||||||||||| || |||||| Sbjct 13065778 CTCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 13065826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354756192608748