Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq2340 89.7 1e-13 >seq2340 Length=6312 Score = 89.7 bits (98), Expect = 1e-13 Identities = 202/298 (68%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 10736 GACCTGAGTCAGTTACCCGTTCCCGACGTGGTTGAGGAACTGGACTATGAAACCATCCTT 10795 ||||| |||||| | |||| || | ||||| ||| | | |||| ||| ||||| Sbjct 1658 GACCTCAGTCAGCTGCCCGCGCCGCAGGTGGTCGAGCAGATCGACTTCGAACAGATCCTC 1599 Query 10796 GCGGAACGCATTGCG-ACGCTGATTTCGCTCTAT--CCCGAAGACCAGCAGGAAGCCATC 10852 || || |||| || | || | || |||| || | || |||||| | ||| Sbjct 1598 GCCGAGCGCAAGGCTTATGCCG---TCAGCCTATGGCCTGCGGATGAGCAGGCCGAGATC 1542 Query 10853 GCCCGGACGC-TCGCACTTGAGTCTGAGCCAATTGTTAAATTGCTGCAGGAAAACGCCTA 10911 ||| | |||| | | || ||||| ||||| || || ||||||||||| |||||||| Sbjct 1541 GCC-GCACGCCTTGAGCTGGAGTCGGAGCCCATCACCAAGTTGCTGCAGGAGAACGCCTA 1483 Query 10912 CCGTGAGGTTATCTGGCGTCAGCGTGTCAATGAAGCTGCACGCGCAGTGATGCTGGCTTA 10971 ||| || | ||| ||||||||| ||||| ||||| | | ||| |||||||| | Sbjct 1482 CCGGGAAATGATCCTGCGTCAGCGGGTCAACGAAGCGTCGCTCGCGGTGATGCTCAGCTC 1423 Query 10972 TGCCATAGACAGTGACCTCGATAATATCGGGGCGAATTTCAATGTTGAGCGCCTTGTC 11029 ||| |||| ||||| || | ||| || || ||||| || ||||||| ||| Sbjct 1422 GGCCGGCGACAACGACCTGGACCAGGTCGCGGGCAACTTCAACGTCAAGCGCCTGGTC 1365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97907843353476