Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 156 4e-33 >seq1 Length=40297282 Score = 156 bits (172), Expect = 4e-33 Identities = 255/367 (69%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 20221 AAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCT 20280 ||| || ||||| |||| || ||||||||||| ||| | || | ||| | ||| Sbjct 21353429 AAAATCACCGGGAGAAAGATCACAAACATGAGCAATCATGCATGTAAGGAGAGCATAAGA 21353488 Query 20281 GGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGA 20340 |||| ||| || || |||||||| |||||||| | || | |||||||| ||||| || Sbjct 21353489 AGCAACGTTGAATGGCACTCCCAATCCCATGTCAGCAGAGCGCTGATACATTTGACATGA 21353548 Query 20341 AAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAA 20400 | || | || || ||||| || || |||| ||| || || |||||||||||||| Sbjct 21353549 CAATTCCCTGTTTGCAACATAGAACTGTGCAAACATGTGGCAAGGTGGAAGCGCCATCAA 21353608 Query 20401 CGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTT 20460 ||| || | || ||||| ||| | | || |||| | || | |||||||| || Sbjct 21353609 TTTCAAATCAGAAGGATTCCAAGCAGAGAGTATAATTCGACGATAATCTGGATTATTCTT 21353668 Query 20461 TAT----TAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT 20516 || ||||| || | | |||| || ||||| || ||||| ||||||||||||| Sbjct 21353669 AATCTTGTAAAT----AACATCCAACAACTGATCAAATCCTTGGCCAGTATAGTCAGCAT 21353724 Query 20517 CCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAAT 20576 | | ||| || ||||| |||| |||||| ||||| ||||| |||||||| | Sbjct 21353725 GCATATTACTATACCTAGCACCAAAATGCCGCCACTGAAAACCATAAACCGGTCCCAAGT 21353784 Query 20577 CCCCCTC 20583 | || || Sbjct 21353785 CACCTTC 21353791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441345484540840