Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq9 178 3e-39 >seq9 Length=39018107 Score = 178 bits (196), Expect = 3e-39 Identities = 314/455 (69%), Gaps = 6/455 (1%) Strand=Plus/Minus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || ||||| ||| |||||| | |||||||| || || | || ||||| || Sbjct 26348049 TCCTTCGCGGAGCGCCTCCTCGCCTTCGCCTGCGTTGAGGGGATCTTCTTCTCCGGCAGC 26347990 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 |||||||||||||| ||||| ||| || | ||||| || ||| | || ||| Sbjct 26347989 TTCTGCGCCATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCGGGGCTCACCTTCTCGAAC 26347930 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||| ||||||||||||||| ||| | |||| || | || || | Sbjct 26347929 GAGCTCATCTCTCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACTCGCTG 26347870 Query 243466 CTCCAGAACAAGCTACCATTCGA--AACGG-TCAAACAAATCATCACAGAAGCAGTTGAA 243522 || | |||||||| | ||| | ||| | || ||| | || || || || Sbjct 26347869 CTGCGGAACAAGC---CGAGCGAGGAGCGGGTGAAGGGGATCGTGCGGGAGGCCGTCGAC 26347813 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | ||| ||| ||| | |||||||| | || ||| || |||| |||||| || Sbjct 26347812 ATCGAGCGGGAGTTCGTCTGCGACGCGCTGCCGTGCGCCCTGGTTGGGATGAACAGCGAC 26347753 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 || ||||| ||||||||||| ||||| |||||||| || || |||||| || | | Sbjct 26347752 CTGATGGGCCAGTACATCGAGTTCGTCGCCGACCGGCTTCTCGGCGCGCTCGGCTGCGGC 26347693 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || |||||| || | |||||| || | || ||||||||||| ||||| || ||||| Sbjct 26347692 AAGGTGTACGACGTGACGAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGGAAG 26347633 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||||||||||| ||||| ||| | || || || Sbjct 26347632 ACCAACTTCTTCGAGAAGCGGGTCGGGGAGTACCA 26347598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102810039151850