Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq4951 87.8 2e-12 seq5 84.2 2e-11 >seq4951 Length=160137 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 40172 GCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 40113 Query 92675 CCC 92677 ||| Sbjct 40112 CCC 40110 >seq5 Length=74729908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 92616 CGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAATC 92675 ||||||||||||||| |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 68694646 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACAGGTTCAAATC 68694587 Query 92676 CCA-CTCC 92682 ||| |||| Sbjct 68694586 CCATCTCC 68694579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526565810141520