Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq2487 102 2e-17 >seq2487 Length=5704 Score = 102 bits (112), Expect = 2e-17 Identities = 129/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 27571 CTCGTACTCGCGCAGGAACTTGCGCACTGTTTCCAGCCTCCAGCATACCCTGACCCCCTG 27630 |||| |||| |||||||||||||| || | | || |||||| || | ||||| Sbjct 3406 CTCGCACTCTTCTAGGAACTTGCGCACCGTGGCTACCCGCCAGCACACACGCTTGCCCTG 3347 Query 27631 CTTGAAGTACGGTGGCAGCCAGTCAGGGCGCGCCTGGATT-GCGCTGCGGATTGATGATT 27689 ||||||| ||||||||||||| | | || || | ||||||||||| |||| | Sbjct 3346 CTTGAAGCACGGTGGCAGCCAA-CTGACTCCGTCTTGCCGCGCGCTGCGGATCGATGCCT 3288 Query 27690 CAGTTCGCCCGAGCAGCTTGGCAAGCTCTGGCACATGGATGATTTCAGGTTCCAT 27744 | || |||||||||| |||||| ||||| || | |||||||| || ||||| || Sbjct 3287 CTGTCCGCCCGAGCATCTTGGCCAGCTCAGGGATGTGGATGATCTCGGGTTCAAT 3233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149859988744908