Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq4951 600 1e-166 seq137 300 2e-76 seq104 293 3e-74 seq8 250 3e-61 seq11 159 4e-34 seq2 129 6e-25 seq4 123 3e-23 seq846 114 1e-20 seq5 105 7e-18 seq953 89.7 6e-13 >seq4951 Length=160137 Score = 600 bits (664), Expect = 1e-166 Identities = 703/949 (74%), Gaps = 6/949 (1%) Strand=Plus/Minus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||| ||||| |||||||||||| ||| | | ||| | || || || ||| Sbjct 1510 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATT 1451 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 || |||||||| || |||||||| ||||| |||||||| | ||||||||| | || || Sbjct 1450 GCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 1391 Query 162661 CTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGT 162720 || || ||||| ||||| || ||||| ||||| | |||||| ||| ||||| ||| Sbjct 1390 CTACTTTATGGAAACAATATTATCTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGT 1331 Query 162721 CTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGA 162780 | || || || || || |||||||| ||| || ||||||| ||||| || || || || Sbjct 1330 TTGCATTTTTACCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGT 1271 Query 162781 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 162840 |||| | || | || | ||||| | | || | | ||| |||||| || Sbjct 1270 CCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAG 1211 Query 162841 TGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 162900 ||||||||| || ||| | |||||||| |||||||| ||||||||| || || || Sbjct 1210 TGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 1151 Query 162901 GTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGAC 162960 || | || || ||||| |||||| |||| || | |||||||| ||| || || Sbjct 1150 GTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCGGAT 1091 Query 162961 GCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCAC 163020 | |||||||| || |||||||||||||| |||| |||| | || ||||| || |||||| Sbjct 1090 GGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAC 1031 Query 163021 AACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTC 163080 |||||||| |||||||| || || ||| | || || || ||||||||||| || || || Sbjct 1030 AACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTA 971 Query 163081 TTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAA 163140 || ||||||||||| ||||| | || || ||| | | ||||| ||||| || || | Sbjct 970 TTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAAT 911 Query 163141 GAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCT 163200 || || || | ||||| | ||||| ||||| ||||| ||||| || || || ||| Sbjct 910 GAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCT 851 Query 163201 GCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCA 163260 |||||||| || ||||| || ||||||||||| ||||| ||||||||| || ||||| Sbjct 850 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCT 791 Query 163261 CTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTG 163320 | ||||||||||| ||||| | ||||| || | |||||||||||||| | ||| | Sbjct 790 TTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATC 731 Query 163321 TCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCA 163377 |||||||| |||||||| || |||||||| |||||||||||||| ||||| | Sbjct 730 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAA 671 Query 163378 GGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAA 163437 ||| || || ||| ||| ||||| ||||| |||| | || |||||||||||| Sbjct 670 GGTCGT---GTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAA 614 Query 163438 GTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 163486 |||||||| || ||||||||||| |||||||| || ||||| ||||||| Sbjct 613 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCTG 565 >seq137 Length=120145 Score = 300 bits (332), Expect = 2e-76 Identities = 324/429 (76%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 162924 CTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGG 162983 |||| |||| || | |||||||| ||| || | | |||||||| || |||||||| Sbjct 112702 CTTGATCTACCCAATTGGTCAAGGAAGTTTTTCGAATGGTATGCCTCTAGGAATTTCTGG 112761 Query 162984 TACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCA 163043 |||||| |||| |||| | || ||||| || |||||||| ||||| |||||||| || || Sbjct 112762 TACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAATATCCTTATGCACCCATTTCA 112821 Query 163044 TATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCT 163103 ||| | || || || ||||||||||| || || || || ||||||||||| ||||| | Sbjct 112822 CATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 112881 Query 163104 TGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAA 163163 || || ||| | | ||||| ||||| || || | || || || | ||||| | Sbjct 112882 GGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAG 112941 Query 163164 GTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTT 163223 ||||| ||||| ||||| ||||| || || || ||||||||||| || ||||| || || Sbjct 112942 ATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATT 113001 Query 163224 GATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATT 163283 ||||||||| ||||| ||||||||| || ||||| | ||||||||||| ||||| | Sbjct 113002 GATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTG 113061 Query 163284 CCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAA 163343 ||||| || | |||| ||||||||| | ||| | |||||||| |||||||| || Sbjct 113062 GCCTGTAGTAGGTATCTAGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAA 113121 Query 163344 CGGTTTCAA 163352 |||||||| Sbjct 113122 TGGTTTCAA 113130 >seq104 Length=304272 Score = 293 bits (324), Expect = 3e-74 Identities = 455/650 (70%), Gaps = 0/650 (0%) Strand=Plus/Minus Query 162832 GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATAC 162891 ||| || ||||||||||| || ||| | |||||| | |||||||| |||||| || Sbjct 122961 GGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGTTGTTGCTTAT 122902 Query 162892 TCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCT 162951 || || || || | || || | ||| |||||| |||| || | |||||||| | Sbjct 122901 TCAGCTCCTGTTGCAGCTGCTACCATTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGT 122842 Query 162952 TTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAA 163011 || | || | |||||| | | |||||| ||||||| | | |||| ||| || | Sbjct 122841 TTTTTGGATGGTATGCCTTTATGAATTTCTAGTACTTTCATTTCCATGATCGCATTATAG 122782 Query 163012 GCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGT 163071 || ||| |||||||||| | |||| || || ||| | || | | |||||||| ||| Sbjct 122781 GCTGAGTACAACATCCTTACACACCAATTTCACATGTTAGGCATGGTTGGTGTATTTGGT 122722 Query 163072 GGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACT 163131 || || | || ||||||||||| ||||| | || || ||| | | || | ||||| Sbjct 122721 GGCTCCTTATTCAGTGCTATGCATGGTTCCTTAGTAACCTCTAGTTTGATAATGGAAACC 122662 Query 163132 ACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAAC 163191 || | | || || || | ||||||| |||| ||||| ||||| ||||| || Sbjct 122661 ACAAAAAATGAATCTTCTAATGAAGGTTATAGATTCGATCAAGAGGAAGAAACTTATAAT 122602 Query 163192 ATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAAC 163251 ||||| ||||||||||| || ||| ||||| || || ||| | ||| ||||| Sbjct 122601 ATTGTAGCTGCTCATGGTTATTTTCACTAATTGATTTTTCAATATACTAGTTTTAACAAT 122542 Query 163252 TCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCA 163311 || | ||| | ||||||||| | ||||| | | || || |||| ||||||||| Sbjct 122541 TCTCATTCTTTACACTTCTTCTTAGCTGCTTGGCTCGTAGTAGATATCTAGTTCACTGCT 122482 Query 163312 ATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTT 163371 | ||| | | |||||| |||||||| || |||||||| |||||||||||| | ||| Sbjct 122481 TTAGGTATTAGCATTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCATAGTT 122422 Query 163372 GACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGT 163431 || | ||| | || ||| |||||| || |||| |||| | | |||||| Sbjct 122421 GATGGTCAAGGTCATGTAATTAATACTTGAGCTAATATTATTAATCGTACTAACCTTGGT 122362 Query 163432 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 163481 |||||||||||||| |||||||||||||| |||||| | || ||||| || Sbjct 122361 ATGGAAGTTATGCATGAGCGTAATGCTCATAACTTCACTCTAGACCTAGC 122312 >seq8 Length=74329289 Score = 250 bits (276), Expect = 3e-61 Identities = 436/630 (69%), Gaps = 22/630 (3%) Strand=Plus/Minus Query 162860 TAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCA---GCATTCG 162916 |||||||||| | || ||| |||||||||||| | || || |||| || | Sbjct 23727119 TAGGTATGCGCCATTAGATTGATGTTGCATACTCATCTCCTGT---TGCAATTGCTACCA 23727063 Query 162917 CTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTA 162976 |||| |||||| |||| || | |||||||| ||| || || | |||||| | | | Sbjct 23727062 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCGGATGGTATGCCTTTATGAA 23727003 Query 162977 TTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACC 163036 ||||||||||||| |||| ||| | || || ||||| || |||| ||||| ||||||| Sbjct 23727002 TTTCTGGTACTTTCAACTTCATAATTGTATTACAAGCTAAGTACAATATCCTTATGCACC 23726943 Query 163037 CCTTCCATATGATTGGAGTC-GCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCAC 163095 | || || ||| || || | || ||||||||| || || | || | || Sbjct 23726942 CATTTCACATG-TTAGACACAGCTAGTGTATTCGACGGCTCCTTATTCA--------CAT 23726892 Query 163096 GGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTAC 163155 ||||| || || || ||| | | || | ||||| || | | || || || | Sbjct 23726891 GGTTCCCTGGTAACCTCTAGTTTGATTGGGGAAACCACATAAAATGAATCTGCTAATGAA 23726832 Query 163156 GGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTT 163215 ||||| | ||| | ||||| ||||| ||||| || ||||| ||||||||||| || || Sbjct 23726831 GGTTACACATTCAGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATATT 23726772 Query 163216 GGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTT 163275 |||||||| || ||| | ||| ||||| || | || | | |||||| | Sbjct 23726771 CACTAATTGATCTTTCAATATACTAGTTTTAACAATTCTCATTGTTTATATTTCTTCTTA 23726712 Query 163276 GCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTC 163335 ||| | | || || || | |||||||||||||| | ||| | |||||||| ||| Sbjct 23726711 GCTACTTGGCCCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTC 23726652 Query 163336 AACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGC---AGGTGGTAAAGTGATT 163392 || || || |||||||| |||||||||| || ||| | | |||| || || ||| Sbjct 23726651 AAACTAAATGGTTTCAATTTCAACCAATTTGTAGTTAATGGTCAAGGTCGT---GTAATT 23726595 Query 163393 CCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGT 163452 ||||||||| |||| |||| | || |||||||||||||||||||| || | | Sbjct 23726594 AATACTTGGGCTAATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACAT 23726535 Query 163453 AATGCTCACAACTTCCCACTTGACCTTGCT 163482 |||||||| |||||||| || ||||| ||| Sbjct 23726534 AATGCTCATAACTTCCCTCTAGACCTAGCT 23726505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 162983 GTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCC 163042 ||||||| |||| |||| | || || | || |||||||||||| | |||||||| || | Sbjct 50259505 GTACTTTCAACTTCATGATTGTACTCTAGGCTGAGCACAACATCTTTATGCACCCATTTC 50259564 Query 163043 ATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTC 163102 | ||| | || || ||||||||| | || | || || ||||||||||| ||||| Sbjct 50259565 ACATGTTAGGCAAAGCTGGTGTATTCAGCGGCTTCCTATTCAGTGCTATGCATGGTTCAT 50259624 Query 163103 TTGTTACTTCTTCTCTTATCAGAGAAAC 163130 | || | ||| | | ||||||||||| Sbjct 50259625 TGGTAATCTCTAGTTTGATCAGAGAAAC 50259652 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 3/147 (2%) Strand=Plus/Plus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||| ||||| |||||||||||| ||| | | || | || || || ||| Sbjct 42137120 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCACAACTTCTGTATTTATTATT 42137179 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 || |||||| || |||||||| ||||| |||||||| | ||||||||| | | || Sbjct 42137180 GCCTTCATT---GCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTAGATCT 42137236 Query 162661 CTTCTCTATGGTAACAACATCATCTCT 162687 || || |||| ||||| || |||||| Sbjct 42137237 CTACTTTATGAAAACAATATTATCTCT 42137263 >seq11 Length=45509462 Score = 159 bits (176), Expect = 4e-34 Identities = 139/173 (80%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 163201 GCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCA 163260 |||||||| || ||||| || ||||||||||| ||||| ||||||||| || ||||| Sbjct 27046473 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCT 27046532 Query 163261 CTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTG 163320 | ||||||||||| ||||| | ||||| || | |||||||||||||| | ||| | Sbjct 27046533 TTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATC 27046592 Query 163321 TCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA 163373 |||||||| |||||||| || |||||||| |||||||||||||| ||||| Sbjct 27046593 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGA 27046645 Score = 138 bits (152), Expect = 1e-27 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 162916 GCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGT 162975 ||||| |||||| |||| || | |||||||| ||| || || | |||||||| || Sbjct 19769035 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCGGATGGTATGCCTCTAGGA 19769094 Query 162976 ATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCAC 163035 |||||||||||||| |||| |||| | || ||||| || |||||||||||||| |||||| Sbjct 19769095 ATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 19769154 Query 163036 CCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTC 163076 || || || ||| | || || || ||||||||||| || || Sbjct 19769155 CCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTC 19769195 >seq2 Length=64235786 Score = 129 bits (142), Expect = 6e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 163063 GTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATC 163122 |||||||| || || || || ||||||||||| ||||| | || || ||| | | ||| Sbjct 24984725 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATC 24984666 Query 163123 AGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAG 163182 || ||||| || || | || || || | ||||| | ||| | ||||| ||||| Sbjct 24984665 AGGGAAACCACAGAAAATGAATCTACTAATGAAGGTTACAGATTCAGTCAAGAGGAAGAA 24984606 Query 163183 ACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCT 163242 ||||| || || || | ||||||||| || ||||| || ||||||||||| ||||| | Sbjct 24984605 ACTTATAATATCGTAGTTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 24984546 Query 163243 TTCAACAACTCACGTTCACTTCACTTCTTCC 163273 |||||||| || ||||| | |||||| ||| Sbjct 24984545 TTCAACAATTCTCGTTC-CCCCACTTCATCC 24984516 Score = 129 bits (142), Expect = 6e-25 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 163228 TTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCT 163287 ||||| ||||| ||||||||| || ||||| | ||||||||||| ||||| | ||| Sbjct 43658961 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCT 43659020 Query 163288 GTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGT 163347 || || | |||||||||||||| | ||| | |||||||| |||||||| || ||| Sbjct 43659021 GTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGT 43659080 Query 163348 TTCAACTTCAACCAATCCGTCGTTGA 163373 ||||| |||||||||||||| ||||| Sbjct 43659081 TTCAATTTCAACCAATCCGTAGTTGA 43659106 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 162544 TGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCA 162603 ||||| ||||| |||||||||||| ||| | | ||| | || || || ||||| Sbjct 30298493 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCC 30298434 Query 162604 TTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCA 162654 |||||||| || |||||||| ||||| |||||||| | ||||||||| || Sbjct 30298433 TTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCA 30298383 >seq4 Length=41978195 Score = 123 bits (136), Expect = 3e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 163120 ATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAA 163179 ||||| ||||| || || | || || || | ||||| | ||||| ||||| ||| Sbjct 34784982 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 34784923 Query 163180 GAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCA 163239 || ||||| || || || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct 34784922 GAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 34784863 Query 163240 TCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGT 163292 ||||||||| || ||||| | ||||||||||| ||||| | ||||| || Sbjct 34784862 AGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGT 34784810 >seq846 Length=16005 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892 || || ||||||||||| || || |||||||| |||||||| ||||||||| | Sbjct 2001 GTTGTGAGTGGGAACTTAGTTTCCATCTAGGTATGTACCCTTGGATTGTTGTTGCATATT 1942 Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952 | | || || | | || | ||| | |||||| |||| | | ||| |||| || Sbjct 1941 CATCTCCCGTTGCAACTGCTATTGCTATTTTCTTGATCTACCTAATTGGTTAAGGAAGTT 1882 Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAG 163012 | || | |||||||| || |||||||||||||| |||| |||| | || ||||||| Sbjct 1881 TTTCGAATTGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTCTTCCAAG 1822 Query 163013 CAGAGCACAACATCCTAATGCACCCCTT 163040 | ||||| |||||||| || ||||| || Sbjct 1821 CTGAGCATAACATCCTTATACACCCATT 1794 >seq5 Length=74729908 Score = 105 bits (116), Expect = 7e-18 Identities = 129/175 (74%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 163270 TTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATG 163329 ||||| ||||| | ||||| || | |||||||||||||| | ||| | |||||| Sbjct 13157527 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATG 13157468 Query 163330 GCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAA 163386 || |||||||| || |||||||| |||||||||||| | ||||| |||| || Sbjct 13157467 GCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCCTAGTTGATAGTCAAGGTCGT--- 13157411 Query 163387 GTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTA 163441 || ||| ||| ||||| ||||| |||| | || |||||||||||||||| Sbjct 13157410 GTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTA 13157356 >seq953 Length=14631 Score = 89.7 bits (98), Expect = 6e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 163242 TTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTG 163301 ||||||||| | ||||| | ||||||||||| ||||| | || || || | |||| Sbjct 1616 TTTCAACAATTTCCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCAGTAGTAGGTATCTA 1675 Query 163302 GTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCA 163361 ||||||||| | ||| | | | |||| |||||||| || |||||||| ||||||| Sbjct 1676 GTTCACTGCTTTAGGTATCGGCATTGTGGCTTTCAACCTAAATGGTTTCAATTTCAACCC 1735 Query 163362 ATCCGTCGTTGA 163373 |||||| |||| Sbjct 1736 ATCCGTAATTGA 1747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553050570964440