Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq4951 529 2e-145 seq137 269 3e-67 seq104 244 1e-59 seq8 210 3e-49 seq11 131 2e-25 seq2 122 1e-22 seq846 116 5e-21 seq4 96.9 4e-15 >seq4951 Length=160137 Score = 529 bits (586), Expect = 2e-145 Identities = 706/976 (72%), Gaps = 4/976 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 570 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 629 Query 7951 GCTCTGTTTAAT-ACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 || | | ||||| | ||| |||| ||| ||| | ||| | | |||||| || || Sbjct 630 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGA 688 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 |||||| || || || || || ||||| || ||||| |||| ||||| | || ||| || Sbjct 689 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAA 748 Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AA 8128 ||| | || ||| || || | | ||| ||||||||||| | | | | ||||| || Sbjct 749 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAA 808 Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188 || | ||||| |||||||| |||| ||||| || ||||||||||| || |||||||| | Sbjct 809 ACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAG 867 Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248 | ||||| |||||||| || | ||||| | || ||| || | ||| || || || | Sbjct 868 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCC 927 Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308 |||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 928 TGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 987 Query 8309 TACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATA 8368 ||| ||||| ||| ||| || || || |||||||| ||||| ||||| || ||||||| Sbjct 988 CACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATA 1047 Query 8369 CGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCT 8428 | | ||||||||| || ||||||||||| ||||||||||| ||||| || || || | Sbjct 1048 CAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAACTTCCTT 1107 Query 8429 GACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTA 8488 |||||| ||| || | ||||| || || |||||| | || ||||| |||||| | Sbjct 1108 GACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAA 1167 Query 8489 CACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAG 8548 || ||||| || | |||||| | ||| | | ||||||| | |||||||||| Sbjct 1168 CAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAAC 1227 Query 8549 CAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608 || | |||| | ||||| | | || | || ||| ||||| ||||| || |||| Sbjct 1228 AAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCGCCGTTGTATAACC 1287 Query 8609 ACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668 | ||||| | | || |||||||| || || || || || || || ||||| |||| Sbjct 1288 ATTCATCAACAGATGCCGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGAAG 1347 Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728 |||| | ||||| ||||| || ||||||||||| | | || || | |||||||| Sbjct 1348 TAGGAATAATGGCACCCGAGATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTT 1407 Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788 |||||||||| || ||||| || || ||||||||||| || || | ||||| || || Sbjct 1408 CACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAG 1467 Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGT 8848 || | || ||| ||| ||||| | ||| |||||||| || | ||||| | ||| | Sbjct 1468 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 1527 Query 8849 TTGTACTTGTAACCCA 8864 || || || | ||| Sbjct 1528 CGGTGCTGGTTATCCA 1543 >seq137 Length=120145 Score = 269 bits (298), Expect = 3e-67 Identities = 315/423 (74%), Gaps = 2/423 (0%) Strand=Plus/Minus Query 8020 TTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAACACAT 8079 || || || || ||||| || ||||| |||| ||||| | || ||| ||| | | || | Sbjct 113130 TTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAACTAGATACCT 113071 Query 8080 ACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATGCATA 8138 || || || | | ||| ||||||||||| | | | | ||||| |||| | ||||| Sbjct 113070 ACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTA-GCATA 113012 Query 8139 CTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTC 8198 |||||||| |||| ||||| || ||||||||||| || |||||||| || ||||| || Sbjct 113011 TTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTCCTC 112952 Query 8199 TTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAGAGA 8258 |||||| || | ||||| | || ||| || | ||| || || || ||||| | | Sbjct 112951 TTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACT 112892 Query 8259 AGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGCTAC 8318 ||| || || || ||||| |||||||||||||| || || || ||||| | ||| ||||| Sbjct 112891 AGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTAC 112832 Query 8319 CCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAA 8378 ||| ||| || || || |||||||| || || ||||| || |||||||| | |||||| Sbjct 112831 GCCTAACATGTGAAATGGGTGCATAAGGATATTGTGCTCAGCCTGGAATACAATCATGAA 112772 Query 8379 GTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGG 8438 ||| || ||||||||||| ||||||||||| |||| || || || ||||||| ||| Sbjct 112771 GTTGAAAGTACCAGAAATTCCTAGAGGCATACCATTCGAAAAACTTCCTTGACCAATTGG 112712 Query 8439 ATA 8441 || Sbjct 112711 GTA 112709 >seq104 Length=304272 Score = 244 bits (270), Expect = 1e-59 Identities = 469/687 (68%), Gaps = 6/687 (1%) Strand=Plus/Plus Query 7887 AGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAA 7946 || ||||| ||||| | |||||| || ||||| | |||||||||||||||||||| | Sbjct 122308 AGTTGCTAGGTCTAGAGTGAAGTTATGAGCATTACGCTCATGCATAACTTCCATACCAAG 122367 Query 7947 GTTTGCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAA 8005 ||| | | | |||||| | | | || ||| ||| | | ||| | | ||||||| | Sbjct 122368 GTTAGTAC-GATTAATAATATTAGCTCAAGTATTAATTACATGACCTTGACCATCAACTA 122426 Query 8006 CTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAG 8065 |||||||| || || || || || ||||| || ||||| ||| |||||| | || || Sbjct 122427 TGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAATGCTAATACCTAAAGCAG 122486 Query 8066 TTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTG--AAGACTTCTACTGTT 8123 | ||| | | | ||| || | | | ||| | ||||||||| |||| | | | | Sbjct 122487 TGAACTAGATATCTACTACGAGCCAAGCAGCTAAGAAGAAGTGTAAAGAATGAGAAT--T 122544 Query 8124 GTTAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATT 8183 |||||| | ||| || || || ||| ||| || ||||||||||| |||||||| Sbjct 122545 GTTAAAACTAGTATATTGAAAAATCAATTAGTGAAAATAACCATGAGCAGCTACAATATT 122604 Query 8184 ATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGT 8243 ||| || ||||| |||||| | || ||||||| | || ||| || | || || || Sbjct 122605 ATAAGTTTCTTCCTCTTGATCGAATCTATAACCTTCATTAGAAGATTCATTTTTTGTGGT 122664 Query 8244 CTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACC 8303 || | || | | ||| || ||||| ||||| |||||||||||||| | || ||||| Sbjct 122665 TTCCATTATCAAACTAGAGGTTACTAAGGAACCATGCATAGCACTGAATAAGGAGCCACC 122724 Query 8304 GAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTG 8363 || | ||| | | ||| ||| || || | || |||| ||||| | ||| || | Sbjct 122725 AAATACACCAACCATGCCTAACATGTGAAATTGGTGTGTAAGGATGTTGTACTCAGCCTA 122784 Query 8364 GAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGA 8423 ||| ||| |||| | | || |||| |||||| | || |||||| ||||| | || Sbjct 122785 TAATGCGATCATGGAAATGAAAGTACTAGAAATTCATAAAGGCATACCATCCAAAAAACT 122844 Query 8424 ACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATA 8483 || ||||||| ||| || | ||||| || | |||||| | || ||||| ||| Sbjct 122845 TCCTTGACCAATTGGGTAGATCAAGAAAACAATGGTAGCAGCTGCAACAGGAGCTGAATA 122904 Query 8484 TGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCAT 8543 || ||| ||||| || | |||||| | ||| | | ||||||| | |||||| Sbjct 122905 AGCAACAACAATCCAAGGGCACATACCCAGACGGAAACTAAGTTCCCACTCACAACCCAT 122964 Query 8544 GTAAGCAGAAATTCCAATAAGGAAGTG 8570 |||| || | |||| | |||||| Sbjct 122965 GTAACAAGCTACACCAAGTAAGAAGTG 122991 >seq8 Length=74329289 Score = 210 bits (232), Expect = 3e-49 Identities = 386/564 (68%), Gaps = 10/564 (2%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| |||||||| || ||||| ||||||||||||||||||||| | ||| Sbjct 23726506 GCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTCCATACCAAGGTTA 23726565 Query 7951 GCTCTGTTTAAT-ACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 || | | ||||| | | | |||| ||| ||| | ||| | | ||| ||| || | Sbjct 23726566 GCAC-GATTAATAATATTAGCCCAAGTATTAATTACACGACCTTGACCATTAACTACAAA 23726624 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 |||||| || || || || || || || || ||||| |||| |||||| | || ||| || Sbjct 23726625 TTGGTTGAAATTGAAACCATTTAGTTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 23726684 Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAA 8129 ||| | || ||| || || | ||||| | |||||| | | || | |||||||| Sbjct 23726685 CCAGATACCTACTACGGGCCAAGTAGCTAAGAAGAAATATAAACAATGAGAATTGTTAAA 23726744 Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189 | ||| || ||||| ||| || || ||||||||||| ||||||||||| || Sbjct 23726745 ACTAGTATATTGAAAGATCAATTAGTGAATATAACCATGAGCAGCTACAATATTATAAGT 23726804 Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249 ||||| ||||||| || | ||||| | || ||| || | || || || || | Sbjct 23726805 TTCTTCCTCTTGACTGAATGTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTTCCCC 23726864 Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309 || | | ||| || || | ||||| || |||| | || || |||| | Sbjct 23726865 AATCAAACTAGAGGTTACCAGGGAACCATG--------TGAATAAGGAGCCGTCGAATAC 23726916 Query 8310 ACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATAC 8369 || ||| || ||| || || || |||||||| || || | || ||||| ||||| Sbjct 23726917 ACTAGCTGTGTCTAACATGTGAAATGGGTGCATAAGGATATTGTACTTAGCTTGTAATAC 23726976 Query 8370 GAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTG 8429 | |||||||| || ||||||||||| | || |||||| ||||| || || || || Sbjct 23726977 AATTATGAAGTTGAAAGTACCAGAAATTCATAAAGGCATACCATCCGAAAAACTTCCTTG 23727036 Query 8430 ACCAAATGGATATACTAAGAACAC 8453 ||||| ||| || | ||||| || Sbjct 23727037 ACCAATTGGGTAGATCAAGAAAAC 23727060 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 8242 GTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCA 8301 || |||||||| | | ||| | || || ||||| |||||||||||||| || | || Sbjct 50259652 GTTTCTCTGATCAAACTAGAGATTACCAATGAACCATGCATAGCACTGAATAGGAAGCCG 50259593 Query 8302 CCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCT 8361 | ||| | ||| ||| ||| ||| || || || ||||||| ||||| ||||| || Sbjct 50259592 CTGAATACACCAGCTTTGCCTAACATGTGAAATGGGTGCATAAAGATGTTGTGCTCAGCC 50259533 Query 8362 TGGAATACGAACATGAAGTTAAACGTAC 8389 | || ||| | ||||||||| || |||| Sbjct 50259532 TAGAGTACAATCATGAAGTTGAAAGTAC 50259505 >seq11 Length=45509462 Score = 131 bits (144), Expect = 2e-25 Identities = 131/170 (77%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 8296 GATCCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGC 8355 || || ||||| | ||| ||||| ||| ||| || || || |||||||| ||||| ||| Sbjct 19769195 GAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGC 19769136 Query 8356 TCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCA 8415 || || |||||||| | ||||||||| || ||||||||||| ||||||||||| ||||| Sbjct 19769135 TCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCC 19769076 Query 8416 GAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGC 8465 || || || ||||||| ||| || | ||||| || || |||||| Sbjct 19769075 GAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGC 19769026 Score = 105 bits (116), Expect = 8e-18 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 7998 ATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACC 8057 |||||| || |||||||| || || || || || ||||| || ||||| |||| ||||| Sbjct 27046646 ATCAACTACGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACC 27046587 Query 8058 CATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCT 8117 | || ||| ||||| | || ||| || || | | ||| ||||||||||| | | | Sbjct 27046586 TAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACG 27046527 Query 8118 ACTGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGC 8171 | ||||| |||| | ||||| |||||||| |||| ||||| || |||||||| Sbjct 27046526 AGAATTGTTGAAACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGC 27046473 >seq2 Length=64235786 Score = 122 bits (134), Expect = 1e-22 Identities = 140/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 8122 TTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAAT 8180 ||||| |||| | ||||| |||||||| |||| ||||| || ||||||||| | || || Sbjct 24984538 TTGTTGAAACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAACTACGAT 24984596 Query 8181 ATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGT 8240 |||||| || ||||| ||||||| || | ||||| | || ||| || | ||| || Sbjct 24984597 ATTATAAGTTTCTTCCTCTTGACTGAATCTGTAACCTTCATTAGTAGATTCATTTTCTGT 24984656 Query 8241 TGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCC 8300 || || ||||| | | ||| || || || ||||| |||||||||||||| || || || Sbjct 24984657 GGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCC 24984716 Query 8301 ACCGAA 8306 ||||| Sbjct 24984717 GCCGAA 24984722 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 8529 CCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATA 8588 ||||| | |||||||||| || | |||| | ||||| | | || |||| ||| Sbjct 39823512 CCACTCACAACCCATGTAACAAGCTACACCAAGTAAGAAGTTTAGAACAATTAACTCATA 39823453 Query 8589 TGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTG 8648 ||||| ||||| || ||||| ||||| | | || |||||||| || || || || || Sbjct 39823452 AGGACCGCCGTTGTATAACCATTCATCAATAGATGCCGCTTCCCATATTGGGTAAAAATG 39823393 Query 8649 TAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACAT 8708 || | |||| | |||| |||| | ||||| ||||| || ||||||| | | | Sbjct 39823392 CAAACGTATAGTTGTAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCTAGAAAG 39823333 Query 8709 GAATGAACCTGCAACAGGTTCACGAATACCGTCGATATC 8747 | || || | |||||||||||| ||| | || || || Sbjct 39823332 TAGAGATCCAGAAACAGGTTCACGGATAGCATCAATTTC 39823294 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 7984 ATTTTACCATTAACATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCC 8043 |||| ||| | | |||||| || |||||||| || || || || || ||||| || ||| Sbjct 43659121 ATTTCACCTTGACTATCAACTACGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCC 43659062 Query 8044 ATTGTGCAAATACCCATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAG 8103 || |||| ||||| | || ||| ||||| | || ||| || || | | ||| |||||| Sbjct 43659061 ATAGTGCTGATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAG 43659002 Query 8104 AAGTGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAA 8144 ||||| | | | | ||||| |||| | ||||| ||||| Sbjct 43659001 AAGTGTAAAGAACGAGAATTGTTGAAACTA-GCATATTGGAA 43658961 >seq846 Length=16005 Score = 116 bits (128), Expect = 5e-21 Identities = 264/393 (67%), Gaps = 17/393 (4%) Strand=Plus/Plus Query 8325 CATATGGAAA-GGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAA 8383 ||| || ||| || || ||||| ||||||||||| |||||||| || | ||||||||| | Sbjct 1786 CATGTGAAAATGGGTGTATAAGGATGTTATGCTCAGCTTGGAAGACAATCATGAAGTTGA 1845 Query 8384 ACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATA 8443 | ||||||||||| ||||||||||| | || || || || | ||||| | | || | Sbjct 1846 AAGTACCAGAAATTCCTAGAGGCATACAATTCGAAAAACTTCCTTAACCAATTAGGTAGA 1905 Query 8444 CTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTC 8503 ||||| | || | ||||| | || |||| |||||| ||| ||||| || Sbjct 1906 TCAAGAAAATAGCAATAGCAGTTGCAACGGGAGATGAATATGCAACAACAATCCAAGGGT 1965 Query 8504 TCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAA 8563 |||||||| || | | ||||||| | || ||||||| | | |||| | Sbjct 1966 ACATACCTAGATGGAAACTAAGTTCCCACTCACAACTCATGTAACAAACTACACCAAGTA 2025 Query 8564 GGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCACTCATCTAATGTGG 8623 |||||| | | || | || ||| ||||| ||||| |||| | || Sbjct 2026 AGAAGTGTAGAACAATTAGCTTATAAGGACCACCGTT---CAAC----------AGATGC 2072 Query 8624 CAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAACGACAGCAC 8683 || ||||||| || || || | || || || ||| | | |||| | || | |||| Sbjct 2073 CA-CTTCCCATATTGGGTAAATATGCAAACCTATAACTATAGAAGTAGTAATAATGGCAC 2131 Query 8684 CAGAGATGATGTTGTTTCCATACATGAATGAAC 8716 ||||||| || ||| ||||||| | | |||||| Sbjct 2132 CAGAGATAATATTG-TTCCATA-AGGTATGAAC 2162 >seq4 Length=41978195 Score = 96.9 bits (106), Expect = 4e-15 Identities = 119/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 8094 AGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAAGATTAATC 8152 ||| ||||||||||| | | | | ||||| |||| | ||||| |||||||| |||| Sbjct 34784824 AGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTA-GCATATTGGAAGATCAATC 34784882 Query 8153 TACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTAT 8212 ||||| || ||||||||||| || |||||||| || ||||| |||||||| || | | Sbjct 34784883 GGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGACCGAATCTGT 34784942 Query 8213 AACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGAT 8252 |||| | || ||| || | ||| || || || ||||| Sbjct 34784943 AACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGAT 34784982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615824285815720