Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 3e-11 >seq8 Length=74329289 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || || || || || ||||| || || Sbjct 36266737 ATGCAGATTTTTGTCAAGACCCTTACTGGGAAGACCATAACTTTGGAAGTTGAGAGCTCG 36266796 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| ||| ||||| || ||||||||||| || ||||| || Sbjct 36266797 GATACCATTGATAATGTCAAAGCTAAGATACAGGACAAAGAAGGCATTCCCCCAGATCAG 36266856 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||||| ||||| ||||| || || ||| Sbjct 36266857 CAGAGGTTGATTTTCGCCGGGAAGCAACTTGAGGAT 36266892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731826706271600