Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq2340 80.6 5e-11 >seq2340 Length=6312 Score = 80.6 bits (88), Expect = 5e-11 Identities = 115/162 (71%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 10085 CTTGAGTCTGAGCCAATTGTTAAATTGCTGCAGGAAAACGCCTACCGCGAGGTTATCTGG 10144 || ||||| ||||| || || ||||||||||| ||||||||||| || | ||| | Sbjct 1526 CTGGAGTCGGAGCCCATCACCAAGTTGCTGCAGGAGAACGCCTACCGGGAAATGATCCTG 1467 Query 10145 CGTCAGCGTGTCAATGAAGCTGCACGCGCAGTGATGCTGGCTTATGCCATAGACAGTGAC 10204 |||||||| ||||| ||||| | | ||| |||||||| | ||| |||| ||| Sbjct 1466 CGTCAGCGGGTCAACGAAGCGTCGCTCGCGGTGATGCTCAGCTCGGCCGGCGACAACGAC 1407 Query 10205 CTCGATAATATCGGGGGAAATTTCAGTGTTGAGCGTCTTGTC 10246 || || | ||| ||| || |||| || |||| || ||| Sbjct 1406 CTGGACCAGGTCGCGGGCAACTTCAACGTCAAGCGCCTGGTC 1365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95047211548848