Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq2487 96.9 1e-15 >seq2487 Length=5704 Score = 96.9 bits (106), Expect = 1e-15 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 22699 AGAAACTTGCGCACGCTCTCTAGCCTCCAGCATACCCGTATGCCCTGCTTGAAGTATGGG 22758 || ||||||||||| | ||| || |||||| || || |||||||||||||| | || Sbjct 3393 AGGAACTTGCGCACCGTGGCTACCCGCCAGCACACACGCTTGCCCTGCTTGAAGCACGGT 3334 Query 22759 GGTAACCAGTCGGGGCGCGAC-TGGATCGCGCTGCGTATTGATGATTCTGTGCGCCCCAG 22817 || | ||| | | || | || ||||||||| || |||| ||||| ||||| || Sbjct 3333 GGCAGCCA-ACTGACTCCGTCTTGCCGCGCGCTGCGGATCGATGCCTCTGTCCGCCCGAG 3275 Query 22818 CAGCTTGGCAAGCTCTGGGACATGGATGATTTCAGGTTCCAT 22859 || |||||| ||||| |||| |||||||| || ||||| || Sbjct 3274 CATCTTGGCCAGCTCAGGGATGTGGATGATCTCGGGTTCAAT 3233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145629837463344