Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 138 9e-28 >seq1 Length=40297282 Score = 138 bits (152), Expect = 9e-28 Identities = 274/404 (68%), Gaps = 4/404 (1%) Strand=Plus/Minus Query 40853 AGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGC 40912 |||| | || |||||||| | || || |||||||| ||||||| ||| |||||||| || Sbjct 21353801 AGATCGAGAAGAAGGTGACTTGGGACCGGTTTATGGTTTTCAGTGGCGGCATTTTGGTGC 21353742 Query 40913 AAAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGT 40972 | ||| | |||| | |||| ||||| ||||| | ||||| || | || Sbjct 21353741 TAGGTATAGTAATATGCATGCTGACTATACTGGCCAAGGATTTGATCAGTTGTTGGATGT 21353682 Query 40973 TATAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCC 41032 ||| | | |||||| |||| ||| || || || ||| | | || ||||| || Sbjct 21353681 TATTTACAAGATTAAGAATAATCCAGATTATCGTCGAATTATACTCTCTGCTTGGAATCC 21353622 Query 41033 AACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG 41092 | || | | |||||||| | |||||||| || |||| ||||| || ||| Sbjct 21353621 TTCTGATTTGAAATTGATGGCGCTTCCACCTTGCCACATGTTTGCACAGTTCTATGTTGC 21353562 Query 41093 CAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCC 41152 || | ||| ||||||||||| ||||||| | || | |||||||||| | || || || Sbjct 21353561 AAACAGGGAATTGTCATGTCAAATGTATCAGCGCTCTGCTGACATGGGATTGGGAGTGCC 21353502 Query 41153 GTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212 || ||| | || ||||||||| || || | |||||||| || ||| || | Sbjct 21353501 ATTCAACGTTGCTTCTTATGCTCTCCTTACATGCATGATTGCTCATGTTTGTGATCTTTC 21353442 Query 41213 ACCTGGTGAATTTGTTCACACGTTA--GGAGATGGACATATTTA 41254 || ||||| ||||| ||| |||| || |||| ||| |||| Sbjct 21353441 TCCCGGTGATTTTGT--ACATGTTATCGGGGATGCTCATGTTTA 21353400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397432017380755