Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq8 102 4e-17 >seq8 Length=74329289 Score = 102 bits (112), Expect = 4e-17 Identities = 145/200 (73%), Gaps = 8/200 (4%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| || ||||||||||| | | ||||| ||||| || | | ||| | Sbjct 39029550 CGAGTCCCAAATTGGCCATTTGGCATGAGAAGGTTAATGTTGTTGCTGCCTACATAATCC 39029609 Query 65147 TGAGCCATTCCGATAATTG--CT-GCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 || |||||||| || || | || ||| | ||| ||||| ||||| ||| ||||| Sbjct 39029610 TGTGCCATTCCAATGATGGTACTAGCA---AGACTTTGCTCACCATGATGGTATGCTGAA 39029666 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 |||||||| ||||| ||| ||| || ||||| ||| ||| | | |||||| ||||| Sbjct 39029667 TGTTCAGATACATAACCAGAAAACTGGGCAACCTTTGCTTCTTTGATGAAATTCCTTTTA 39029726 Query 65264 AAT--GCAGAATACAATATT 65281 ||| |||||||| ||| || Sbjct 39029727 AATGAGCAGAATAGAATTTT 39029746 Score = 98.7 bits (108), Expect = 5e-16 Identities = 144/200 (72%), Gaps = 8/200 (4%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| || ||||| ||||| | | ||||||||||| || | ||||| | Sbjct 36953165 CGGGTCCCAAATTGGCCATTCGGCATGAGAAGGTTAATATTGTTGCTGCCTACAAAATCC 36953106 Query 65147 TGAGCCATTCCGATAAT--TGCT-GCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 || ||||||||||| || | || ||| | ||| ||||| ||||| ||| ||||| Sbjct 36953105 TGTGCCATTCCGATTATGGTACTAGCA---AGACTTTGCTCACCATGATGGTATGCTGAA 36953049 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 || ||||| ||||| ||| ||| || ||||| ||| ||| | | |||||| |||| Sbjct 36953048 TGCTCAGATACATAACCAGAAAACTGGGCAACCTTTGCTTCTTTGATGAAATTCCTTTTG 36952989 Query 65264 AAT--GCAGAATACAATATT 65281 ||| |||||| | ||| || Sbjct 36952988 AATGAGCAGAAAAGAATTTT 36952969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235665778995150