Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20grandis_20[refseq_20GCF_5F000612305.1_202014-05-02] 4,951 sequences; 691,429,809 total letters Query= NC_028701.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq2340 122 2e-23 >seq2340 Length=6312 Score = 122 bits (134), Expect = 2e-23 Identities = 197/281 (70%), Gaps = 12/281 (4%) Strand=Plus/Minus Query 10445 GGTGGTAGAACCGCTGGACTTCGAAACGCTTTTCGCGCAGCGCAAGGCCGCATTTATTGC 10504 |||||| || | | | ||||||||| | | |||| |||||||||| |||| | Sbjct 1632 GGTGGTCGAGCAGATCGACTTCGAACAGATCCTCGCCGAGCGCAAGGC-----TTATGCC 1578 Query 10505 GA-----TGTACCCGGAAGACGAGCAGGAAGAGATCGCCCGCACGC-TTGAGCTTGAATC 10558 | | | || | || ||||||| ||||||||| |||||| ||||||| || || Sbjct 1577 GTCAGCCTATGGCCTGCGGATGAGCAGGCCGAGATCGCC-GCACGCCTTGAGCTGGAGTC 1519 Query 10559 GGAGCCGATCACCATGCTGCTGGAAGAGAATTGCTATCGCGAATTGCTGTTGCGCCAGCG 10618 |||||| ||||||| | ||||| | ||||| ||| || ||| || | |||| ||||| Sbjct 1518 GGAGCCCATCACCAAGTTGCTGCAGGAGAACGCCTACCGGGAAATGATCCTGCGTCAGCG 1459 Query 10619 GGTGAATGAAGCGGCCCGCGCGGTGATGCTGGCTTATTCCACGGATAGCGATCTGGATAA 10678 ||| || |||||| | | |||||||||||| | || || | ||| ||||| | Sbjct 1458 GGTCAACGAAGCGTCGCTCGCGGTGATGCTCAGCTCGGCCGGCGACAACGACCTGGACCA 1399 Query 10679 TCTGGCGGTCAATTTCAACGTTGAACGTCTGACCATTCAgg 10719 | |||| ||| |||||||| | || ||| |||||||| Sbjct 1398 GGTCGCGGGCAACTTCAACGTCAAGCGCCTGGTCATTCAGG 1358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107100902833002