Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq77 111 2e-19 >seq77 Length=18658056 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 54178 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 54237 |||| |||||| ||||| | || | ||| || | |||| ||||||||| ||| |||| Sbjct 17991228 TTTGCCTCCTCCTTGATCAACATAACGAGCAGTATCATTAAAAACTCTCAGCATCGGAAC 17991169 Query 54238 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 54297 ||| ||||| |||| |||||| || || || || ||||| | |||||||| ||| Sbjct 17991168 AATTCCATTAGATGTACCATTCGTGCCACGAATGTAACTTCCCATTGCACGAATGTTATG 17991109 Query 54298 AATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 54357 || |||| || || || || || |||| || | || || ||| ||||| || Sbjct 17991108 AACCGATACGCCAATTCCACCAGCTGATTTACTTATAACAGCACACTCTTTCAACGTCTC 17991049 Query 54358 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 54406 ||| || || || ||||||||||| |||| || | |||||||||| Sbjct 17991048 ATAAATCCCTTCAATACTATCATCTTTCATACAAATCAAAAAACAGCTA 17991000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720412556800