Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq126 109 4e-19 seq77 82.4 5e-11 >seq126 Length=8766530 Score = 109 bits (120), Expect = 4e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 |||||||| || | | ||| |||| || |||||||| | |||| |||||| |||| Sbjct 4332177 TGAGCATCCCCAATAACATGAGTAAAGTCACCAGGAACAAGATCACAGACATGAGCGAGG 4332236 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 || ||||| | ||||| ||| |||||||||||| || || || || ||||| || ||| Sbjct 4332237 ATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGTACACCAAGGCCCATGTCCGCT 4332296 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACA 97251 || | ||||| | ||||| || |||| ||| || ||||| ||||| || | Sbjct 4332297 GAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCTACATAGAACTGTGCAAACATG 4332356 Query 97252 TGACAGGGGGGCAACGCCAT 97271 ||||| || || | |||||| Sbjct 4332357 TGACATGGAGGAAGCGCCAT 4332376 >seq77 Length=18658056 Score = 82.4 bits (90), Expect = 5e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 |||||| |||| || || || | || ||| || |||||||||||| || || || || Sbjct 13060739 GACATGAGCGAGAATGCATGTAAGTAAAGAGTACGAAGCAATGTTAAACGGTACACCGAG 13060680 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 |||||||||||||| | |||||| | ||||| ||||| | ||||| || ||||| Sbjct 13060679 ACCCATATCAGCTGAACGTTGATACATTTGACATGAAAGTTCTCCATTCGCTACGTAAAA 13060620 Query 97239 CTG 97241 ||| Sbjct 13060619 CTG 13060617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783323771200