Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq139 122 1e-22 seq80 122 1e-22 seq64 116 4e-21 seq101 111 2e-19 seq126 107 2e-18 seq72 105 8e-18 seq75 100 3e-16 seq92 87.8 2e-12 >seq139 Length=20634497 Score = 122 bits (134), Expect = 1e-22 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||||||| | ||| ||| || || ||||||||||| || || || || | Sbjct 11242681 ACGCAACACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAATCGGCAAGCGTGCGACC 11242622 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||||||||||||||| |||| |||||||| | || | | ||| || Sbjct 11242621 ATCTTCAAGCTGCTTACCAGCGAATATAAGTCTTTGCTGGTCTGGAGGGATTCCCTCTTT 11242562 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| || ||| | | | | ||||| |||| || || || | || Sbjct 11242561 GTCCTGGATCTTGGCTTTCACATTATCGATGGTGTCTGAGCTC---TCAACCTCCAAGGT 11242505 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || || ||||| |||||||||||||| Sbjct 11242504 GATAGTTTTACCAGTCAGAGTCTTCACAAAGATTTGCAT 11242466 >seq80 Length=21647715 Score = 122 bits (134), Expect = 1e-22 Identities = 157/213 (74%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||| | ||| |||||||||||| ||||| ||||| ||||||| |||| || Sbjct 2366770 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCGAGAGTCCTTCCGTCTTCA 2366711 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| | ||| || ||||| | |||||| || | || | | ||| |||||| || Sbjct 2366710 AGCTGCTTCCTAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATTCCCTCTTTGTCC-TG 2366652 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | | |||| || | | | | | | ||||| |||| || || || | |||||||| Sbjct 2366651 AATCTTTGCTTTAACATTGTCAATGGTGTCTGAGCTC---TCAACTTCCAAAGTGATGGT 2366595 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || |||||||| |||||||| ||||| Sbjct 2366594 TTTACCAGTGAGCGTCTTCACAAAGATCTGCAT 2366562 Score = 104 bits (114), Expect = 3e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||||||||| || || || | || ||| ||||| ||||| || Sbjct 2366525 CTCCTTTTGAATATTGTAATCAGCGAGTGTGCGACCATCCTCTCATTGCTTTCCAGCAAA 2366466 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || |||| |||||| || | || | | || |||||| ||| | || | ||||| Sbjct 2366465 GATAAGTCTCTGCTGATCCGGAGGGATTCCTTCTTTGTCC-TGAATCTTAGCTTTGACAT 2366407 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || ||| || || | |||||||||||||| ||||| ||||| | Sbjct 2366406 TGTCAATGGTATCAGAACTTTCAACTTCTAGTGTGATGGTTTTGCCAGTTAGAGTCTTGA 2366347 Query 43171 CAAAGATTTGCATT 43184 |||||||||||||| Sbjct 2366346 CAAAGATTTGCATT 2366333 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || ||||||||||||||||||| |||||| | || |||| |||||||||||||| Sbjct 2367209 CTCTTTCTGAATATTGTAATCAGCCAAAGTCCGACCATCCTCTAATTGCTTACCAGCGAA 2367150 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| | ||| || || | || | | ||||||||| ||| |||| | || | Sbjct 2367149 GATGAGCCTCTGTTGATCCGGTGGGATCCCTTCCTTGTCC-TGAATTTTAGCCTTCACAT 2367091 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | || || || ||||| || | |||| Sbjct 2367090 TATCAATAGTGTCTGAGCTC---TCAACCTCCAAGGTTATCGTCTTGCCAGTCAAAGTCT 2367034 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 2367033 TCACGAAGATTTGCAT 2367018 >seq64 Length=9524166 Score = 116 bits (128), Expect = 4e-21 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||||||| | || ||| ||||| |||||||||||||| || |||| | Sbjct 3905527 ACGCAACACCAAATGTAGAGTTGACTCTTTTTGGATATTGTAATCAGCAAGTGTCCTTCC 3905468 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||||||| ||||||| |||| |||||||| || | | ||||| Sbjct 3905467 GTCTTCAAGCTGCTTACCATCGAATATAAGTCTCTGCTGGTTCAGAGGGATTCCTTCCTT 3905408 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| ||| || | | | | ||||| |||| || || || | || Sbjct 3905407 GTCCTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAGCTC---TCAACCTCCAAAGT 3905351 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||| | ||||| |||||||| ||||| Sbjct 3905350 GATCGTTTTCCCAGTTGGAGTCTTGACAAAGATCTGCAT 3905312 >seq101 Length=14560423 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | ||||||||| |||||| || ||||||||||| |||| |||||| | Sbjct 13329877 ACGCAACACAAGATGCAATGTAGACTCCTTCTGGATATTGTAATCCGCCAAAGTCCGACC 13329818 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| || || ||||| || |||| ||||||||| | || | | |||||| Sbjct 13329817 ATCCTCAAGCTGTTTTCCGGCGAAGATAAGTCTCTGCTGGTCCGGTGGGATCCCCTCCTT 13329758 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | || | |||| | | | ||||| |||| || || || | | Sbjct 13329757 GTCC-TGAATCTTAGCCTTGACATTGTCTATTGTGTCTGAGCTC---TCAACCTCCAAAG 13329702 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || || ||||| || || || ||||| Sbjct 13329701 TGATGGTCTTTCCGGTAAGAGTCTTGACGAAAATCTGCAT 13329662 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||| || |||||||| |||||| Sbjct 1861027 CCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGCC 1860968 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || |||| || |||||||| || ||||| || | || ||||||||| | || Sbjct 1860967 AATGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 1860908 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTC---GCTCGATTC 43132 | | |||||||| ||| || ||||| ||| | | | ||||| |||| || Sbjct 1860907 ATACCTTCCTTGTCTTGGATCTTGGCTTTGA-CGTTGTCGATGGTGTCTGAGCTC---TC 1860852 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| || | |||||| || ||||||||||| Sbjct 1860851 AACTTCCAAGGTGATGGTCTTGCCAGTCAACGTCTTCACGAAGATTTGCAT 1860801 Score = 100 bits (110), Expect = 3e-16 Identities = 157/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| ||||||||| || ||||| ||||| ||||| | | Sbjct 13329421 ACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTTCTTCC 13329362 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || |||||||||||||| || |||| ||||| || | || | | || || Sbjct 13329361 ATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATACCTTCTTT 13329302 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 || | ||| | || | || | ||| | | | ||||| ||| ||| || || | | Sbjct 13329301 GT-CTTGAATCTTAGCTTTAACGTTGTCAATGGTGTCAGAGCT---TTCAACTTCAAGAG 13329246 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||||| || || || || ||||| || |||||||||||| Sbjct 13329245 TGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCATT 13329205 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||||||| | || ||| || || ||||||||||| |||| ||||| | Sbjct 13330105 ACGCAACACCAAATGAAGAGTCGACTCTTTCTGGATATTGTAATCCGCCAAGGTCCGACC 13330046 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| || || |||||||| |||| ||||||||| | || | | ||||| Sbjct 13330045 ATCCTCAAGCTGTTTTCCGGCGAATATCAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTT 13329986 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | || | |||| | | | |||||| |||| || || || | | Sbjct 13329985 GTCC-TGAATCTTAGCCTTGACATTATCAATCGTGTCTGAGCTC---TCAACCTCCAAGG 13329930 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || || || | ||||| |||||||| ||||| Sbjct 13329929 TAATAGTCTTACCTGTCAATGTCTTCACAAAGATCTGCAT 13329890 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/202 (71%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045 |||| ||| ||||| || |||||||| |||| ||||| | || || ||||| || || Sbjct 13329631 TGTGGACTCTTTTTGGATGTTGTAATCCGCCAAGGTCCGACCATCCTCGAGCTGTTTTCC 13329572 Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-T 43104 ||||||||||||| ||||||||| | || | | |||||||| ||| | || | | Sbjct 13329571 GGCGAATATGAGTCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCT-TGAATCTTCGCCT 13329513 Query 43105 TGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 43161 | | | | | ||||| |||| ||||| || | || || ||||| || || | Sbjct 13329512 TCACATTATCAATGGTGTCTGAGCTC---TCCACCTCCAAGGTTATTGTTTTTCCGGTGA 13329456 Query 43162 GCGTCTTTACAAAGATTTGCAT 43183 | ||||| |||||||||||||| Sbjct 13329455 GTGTCTTGACAAAGATTTGCAT 13329434 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| ||||| || || ||||||||||||| || || |||| || Sbjct 1860553 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCGTCTTCC 1860494 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | |||||| || ||||| || || | |||||| || | || | | ||||| ||| || Sbjct 1860493 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCCTTCCTTATCC-TG 1860435 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | || | | | ||| | | | |||||| ||| |||||| |||| |||||||| Sbjct 1860434 GATCTTGGCCTTAACGTTGTCGATCGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGT 1860378 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || ||||| || ||||| ||||| Sbjct 1860377 CTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 1860345 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||||| ||| | |||||||| | || ||||| || || |||||||| || Sbjct 13329205 TCCTCCTCTTAGACGGAGGACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGC 13329146 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 | ||| || | || || | ||| || || ||||| || | || ||||| || | || Sbjct 13329145 TAAAGTACGGCCATCTTCCAACTGTTTTCCGGCGAAGATCAATCTTTGCTGATCCGGAGG 13329086 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | | ||||||| | || | |||| | | ||| | | | ||||| |||| | Sbjct 13329085 AATTCCTTCCTTGT-CTTGGATCTTTGCCTTAACGTTGTCGATGGTGTCAGAGCTC---T 13329030 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || |||| |||||||| ||||| || || || || || ||||||||||| Sbjct 13329029 CGACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 13328978 >seq126 Length=8766530 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||||||| | ||||| || | || |||||||| |||||||||||| || Sbjct 5178442 CCACCTCTTAAACGTAGAACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAATCACCC 5178501 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || |||| ||| || || || ||||| | || ||| ||||| | || Sbjct 5178502 AATGTACGTCCATCTTCTAACTGTTTCCCTGCAAATATCAATCTCTGTTGGTCTGAAGGA 5178561 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | || || ||| |||||| ||||| ||| | | ||||||||| ||| || Sbjct 5178562 ATTCCTTCTTTCTCCTGGATTTTAGCTTTGA-CGTTGTCAACCGTGTCGGAGCTTTCAAC 5178620 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || ||||| ||||| || || ||||| || ||||||||||| Sbjct 5178621 CTCCAATGTTATGGTCTTGCCTGTAAGAGTCTTCACGAAGATTTGCAT 5178668 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/197 (73%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||| ||||| || ||||| || | || || ||||| ||||||||||| Sbjct 5178022 TCCTTCTGAATATTATAATCTGCAAGAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAG 5178081 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||||| ||| ||||| | || | | ||||||| | ||| | || | |||| ||| Sbjct 5178082 ATGAGTCTCTGTTGGTCCGGAGGGATTCCTTCCTTGT-CTTGAATCTTCGCCTTGA-CGT 5178139 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| || || || | || || ||||| || ||||| || | Sbjct 5178140 TGTCAATCGTGTCCGAGCTC---TCAACTTCTAAGGTAATTGTTTTACCAGTTAGGGTTT 5178196 Query 43168 TTACAAAGATTTGCATT 43184 | ||||| ||||||||| Sbjct 5178197 TCACAAATATTTGCATT 5178213 >seq72 Length=2807273 Score = 105 bits (116), Expect = 8e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||| ||||| |||||||||||| Sbjct 226814 CCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGCC 226873 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || |||| || | ||||| || ||||| || | || |||||||| | || Sbjct 226874 AAGGTACGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCCGGTGGG 226933 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||| |||||| ||||| | | | |||||| |||| || Sbjct 226934 ATACCTTCCTTGTCTTGGATTTTAGCTTTGACATTGTCGATCGTGTCTGAGCTC---TCA 226990 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||||||||| || | |||||| || ||||| ||||| Sbjct 226991 ACTTCCAAGGTGATGGTTTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 227040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| || || | || || || ||||| || ||||| Sbjct 227077 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAA 227136 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || ||||||||| | || | | |||||||||| ||| || ||||| ||| Sbjct 227137 GATCAATCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTAGCTTTGA-CGT 227195 Query 43112 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| ||||| || | ||||| Sbjct 227196 TGTCGATTGTGTCAGAGCTC---TCAACCTCTAGGGTGATGGTCTTGCCGGTCAACGTCT 227252 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 227253 TCACGAAGATTTGCAT 227268 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| ||||| || || |||||||| |||| || || |||| || Sbjct 227516 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCC 227575 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||||||||| ||||| || |||| ||||| || | || | | ||||| ||| | Sbjct 227576 AACTGCTTACCGGCGAAGATAAGTCTTTGCTGATCCGGAGGAATCCCTTCCTTATCCTGG 227635 Query 43095 ATTTTTTGTTTGAGCGTCGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 || || || | ||| | | | |||||| ||| |||||| |||| |||||||| Sbjct 227636 ATCTTGGCCTTAA-CGTTGTCGATCGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGT 227691 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || ||||| || ||||||||||| Sbjct 227692 CTTGCCGGTGAGGGTCTTAACGAAGATTTGCAT 227724 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || |||||||||||| || | || |||||| ||||| || || |||||| Sbjct 226586 CCACCACGTAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGCC 226645 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || || ||||| ||||| || ||||| |||||||| || | || Sbjct 226646 AAGGTGCGACCATCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGG 226705 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||| ||| ||| | || | | ||| | | | ||||| |||| || Sbjct 226706 ATACCTTCCTTATCC-TGAATCTTGGCCTTCACGTTGTCGATTGTGTCTGAGCTC---TC 226761 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | || ||||| ||||| || || ||||| || || || ||||| Sbjct 226762 CACCTCCAGAGTAATGGTCTTGCCGGTAAGTGTCTTGACGAAAATCTGCAT 226812 >seq75 Length=6520592 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 2456200 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCTTCGAGCTGCTTTCCGGCGAA 2456259 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | |||||||||||| | || | | |||||||| ||| || |||| | Sbjct 2456260 AATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATT 2456319 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || |||| ||||| || || |||||||| || || || Sbjct 2456320 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTCAC 2456379 Query 43172 AAAGATTTGCATTTTTACGC 43191 ||||| ||||| ||| ||| Sbjct 2456380 GAAGATCTGCATCTTTTCGC 2456399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| ||||| || || ||||||||||||| || || |||| || Sbjct 967681 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAACGTGCGACCGTCTTCC 967622 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||||| || ||||| || || | ||||| || | || | | ||||||||| || Sbjct 967621 AATTGCTTTCCCGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTGTCC-TG 967563 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | || | || | ||| | | | ||||||| |||||| |||| |||||||| || Sbjct 967562 GATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTT 967503 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || || || || |||||||| Sbjct 967502 GCCGGTGAGAGTTTTAACGAAAATTTGCAT 967473 >seq92 Length=17487894 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/221 (71%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | || | ||| ||||||||||| || || || || ||||| || | Sbjct 12100028 ACGCAACACAAGGTGAAGTGTTGATTCCTTTTGAATGTTCTAGTCTGCAAGAGTGCGACC 12099969 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT-CGGCCGGCACGCTCTCCT 43086 || || ||||| ||||||||||| ||||||| ||| | || ||| || | || |||| Sbjct 12099968 ATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTCGTCCGGTTGGATCCCT-TCCT 12099910 Query 43087 TGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACC 43142 |||| ||| || |||| ||| | | | ||||| |||| ||||| || | Sbjct 12099909 TGTCTTGGATCTTAGCCTTGA-CGTTGTCAATAGTGTCTGAGCTC---TCCACTTCTAGG 12099854 Query 43143 GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| | || || ||||| ||||| || ||||| Sbjct 12099853 GTTATGGTTTTACTGGTAAGAGTCTTGACAAATATCTGCAT 12099813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816456364800