Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq77 116 7e-21 seq126 107 4e-18 >seq77 Length=18658056 Score = 116 bits (128), Expect = 7e-21 Identities = 179/251 (71%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-AA 35523 |||||||| ||| | || ||||||| || || || | || | | | |||| || Sbjct 13060473 GATTATACAGGACAAGGATTTGATCAGCTGTTAGATGTAATTAACAAGATCA-AGAACAA 13060531 Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583 ||| |||||| || |||| || || | || |||||||| |||||| | || ||||| Sbjct 13060532 TCCTGATGATCGACGGATTATAATCTCAGCTTGGAATCCATCTGATCTTAAACTGATGGC 13060591 Query 35584 TCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643 |||||||||||||||||| ||| || ||||| || || ||||||||| | || || || Sbjct 13060592 GCTTCCTCCATGCCACATGTTTGCACAGTTTTACGTAGCGAATGGAGAACTTTCATGTCA 13060651 Query 35644 GTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATAC 35701 ||||||| || ||| || ||| || | || || || || || ||||| || ||| Sbjct 13060652 AATGTATCAACGTTCAGCTGATATG--GGTCTCGGTGTACCGTTTAACATTGCTTCGTAC 13060709 Query 35702 TCTCTTCTGAC 35712 ||| | || || Sbjct 13060710 TCTTTACTTAC 13060720 >seq126 Length=8766530 Score = 107 bits (118), Expect = 4e-18 Identities = 180/253 (71%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 35465 GATTATACTGGA-AAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-A 35522 ||||||||||| |||||| |||||||| | | || || | | | | | |||| | Sbjct 4332490 GATTATACTGGCCAAGGGT-TTGATCAACTCGTGGATGTAATCGACAAGATCA-AGAACA 4332433 Query 35523 ATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGG 35582 |||| |||||| || | || || | | || ||||||||| ||||| | | |||| Sbjct 4332432 ATCCTGATGATCGACGCATCATATTATCAGCTTGGAATCCTTCTGATCTCAAATTGATGG 4332373 Query 35583 CTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCC 35642 | ||||||||||| |||||| ||| || || ||||| || | ||||| | || || | Sbjct 4332372 CGCTTCCTCCATGTCACATGTTTGCACAGTTCTATGTAGCAGAAGGAGAGCTCTCATGTC 4332313 Query 35643 AGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATA 35700 | |||||||||| |||||| ||| || | || || || || || ||||| || || Sbjct 4332312 AAATGTATCAGCGTTCAGCGGACATG--GGCCTTGGTGTACCGTTTAACATTGCTTCCTA 4332255 Query 35701 CTCTCTTCTGACT 35713 ||||||||| ||| Sbjct 4332254 CTCTCTTCTTACT 4332242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581971352800