Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq77 95.1 6e-15 >seq77 Length=18658056 Score = 95.1 bits (104), Expect = 6e-15 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||||||||| ||||| |||||||| || || | ||||| ||||| |||||| ||| Sbjct 17991238 TACCTTTTCTTTTGCCTCCTCCTTGATCAACATAACGAGCAGTATCATTAAAAACTCTCA 17991179 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 ||| ||||| | |||| | || || || |||| | |||| | ||| | | | Sbjct 17991178 GCATCGGAACAATTCCATTAGATGTACCATTCGTGCCACGAATGTAACTTCCCATTGCAC 17991119 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTG 26243 ||| | ||| | | || ||||||||||| |||| ||| | ||||| ||| Sbjct 17991118 GAATGTTATGAACCGATACGCCAATTCCACCAGCTGATTTACTTATAACAGCACACTCTT 17991059 Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACA 26298 | || || |||| |||| || |||||| ||||||| | | |||||||| Sbjct 17991058 TCAACGTCTCATAAATCCCTTCAATACTATCATCTTTCATACAAATCAAAAAACA 17991004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039506572000