Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq126 109 5e-19 >seq126 Length=8766530 Score = 109 bits (120), Expect = 5e-19 Identities = 170/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 118489 TAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAG--CCCTGTCAGGT 118546 || ||||||||||||||||| ||| | || |||||||| ||| | | | || | Sbjct 4332171 TACACATGAGCATCCCCAATAACATGAGTAAAGTCACCAGGAACAAGATCACAGACA--T 4332228 Query 118547 GAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCA 118606 |||| | ||| | || | | | |||| || | ||||| || ||||| || |||| Sbjct 4332229 GAGCGAGGATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGTACACCAAGGCCCA 4332288 Query 118607 TGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGAC 118666 |||| ||||| | ||| |||| ||| || |||||||| || | ||| ||||| ||||| Sbjct 4332289 TGTCCGCTGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCTACATAGAACTGTG 4332348 Query 118667 TTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGATTCCAGGCTGTTA 118726 | |||||||||||||| || |||| | | || | | ||||||||| |||| || Sbjct 4332349 CAAACATGTGACATGGAGGAAGCGCCATCAATTTGAGATCAGAAGGATTCCAAGCTGATA 4332408 Query 118727 A 118727 | Sbjct 4332409 A 4332409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414475991770240