Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq126 89.7 4e-13 >seq126 Length=8766530 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/223 (70%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 29722 GACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAG 29781 ||| ||||| | ||| | || || ||||||||| || |||||||| || || || || Sbjct 4332224 GACATGAGCGAGGATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGTACACCAAG 4332283 Query 29782 CCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC-GCTCACGTAAA 29840 ||||||||| |||| | ||| || | || || ||||||||||| || ||| || || | Sbjct 4332284 GCCCATGTCCGCTGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCT-ACATAGA 4332342 Query 29841 ACTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCC 29897 |||| | ||||| || || |||||||| ||||| | | || || |||| Sbjct 4332343 ACTGTGCAAACATG---TGACATGGAGGAAGCGCCATCAATTTGAGATCAGAAGGATTCC 4332399 Query 29898 AGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 29940 | || | | |||||||| | || || || |||||| |||| Sbjct 4332400 AAGCTGATAATATGATGCGTCGATCATCAGGATTGTTCTTGAT 4332442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162407981760