Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq126 91.5 1e-13 >seq126 Length=8766530 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 27216 GACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAG 27275 ||| ||||| | ||| | || || ||||||||| || |||||||| ||||| || || Sbjct 4332224 GACATGAGCGAGGATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGTACACCAAG 4332283 Query 27276 CCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAA 27335 ||||||||| | || | ||| || | ||||| ||||||||||| || ||| || || Sbjct 4332284 GCCCATGTCCGCTGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCTACATAGAA 4332343 Query 27336 CTG---ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCA 27392 ||| | | || ||| || |||||||| ||||| | | || || ||||| Sbjct 4332344 CTGTGCAAACAT---GTGACATGGAGGAAGCGCCATCAATTTGAGATCAGAAGGATTCCA 4332400 Query 27393 GGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 27434 || | | |||||||| | || || || |||||| |||| Sbjct 4332401 AGCTGATAATATGATGCGTCGATCATCAGGATTGTTCTTGAT 4332442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506479460960