Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=21755756 Score = 93.3 bits (102), Expect = 3e-14 Identities = 174/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 18869 GCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCG 18928 ||||||| | ||||||||| ||| || | | || || | || || || || Sbjct 2317069 GCAAGGATTTGATCAGCTGTTGGATGTAATCAACAAGATCAAGAACAATCCTGATGATCG 2317128 Query 18929 ACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATG 18988 ||| || || || || |||||||||| ||| | | |||| ||| |||||||| Sbjct 2317129 ACGGATTATAATGTCAGCTTGGAATCCTCCAGATCTTAAGCTGATGGCACTTCCTCCATG 2317188 Query 18989 TCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAG 19048 |||| ||| || || ||||||||||| || ||| | || || ||| | || ||| | Sbjct 2317189 CCACATGTTTGCACAATTCTACGTTGCAAATGGAGAACTTTCATGTCAAATGTATCAGCG 2317248 Query 19049 ATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTA 19108 || | || ||||| ||||| ||||| || |||||||| ||| | |||||||| | Sbjct 2317249 CTCAGCCGACATGGGTCTTGGTGTACCATTTAACATTGCCTCATACTCCCTTCTTACATG 2317308 Query 19109 CATAGTAGCGCATGTT 19124 ||| | || || ||| Sbjct 2317309 CATCCTCGCTCACGTT 2317324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399500893606710