Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq33 82.4 6e-11 seq2 82.4 6e-11 >seq33 Length=9343251 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 || || ||||||||||| ||||| || |||||| | |||||| ||| |||| ||| Sbjct 3270584 GACCAGCAAAGACTTATTTTTGCCGGTAAACAACTCGAAGATGGTCGTACTTTGGCTGAT 3270525 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| |||||||| || ||||||||| | || | || || || || || Sbjct 3270524 TACAATATCCAAAAGGAGTCAACTCTTCACCTTGTCCTTCGTTTGCGCGGTGG 3270472 >seq2 Length=11923138 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | || ||||| ||||| || || ||||| || || ||| ||||| Sbjct 8290340 GACAAAGAAGGTATACCACCTGATCAGCAAAGGCTGATATTTGCCGGTAAGCAACTGGAA 8290399 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| | || |||||||| || || || || ||||||||||| |||||||| Sbjct 8290400 GATGGAAGAACCCTAGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTGGTGTTA 8290459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410793605798132