Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 136 8e-27 >seq1 Length=21755756 Score = 136 bits (150), Expect = 8e-27 Identities = 151/198 (76%), Gaps = 5/198 (3%) Strand=Plus/Plus Query 35518 AGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACC 35576 |||| ||||| |||||| || |||| || ||| | || ||||||||| |||||| | | Sbjct 2317110 AGAACAATCCTGATGATCGACGGATTATAATGTCAGCTTGGAATCCTCCAGATCTTAAGC 2317169 Query 35577 TTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGT 35636 | ||||| |||||||||||||||||| ||| ||||| || || || ||||||||| | | Sbjct 2317170 TGATGGCACTTCCTCCATGCCACATGTTTGCACAATTCTACGTTGCAAATGGAGAACTTT 2317229 Query 35637 CGTGCCAGTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 | || || |||||||||| ||| || ||| || | || || || || || ||||| Sbjct 2317230 CATGTCAAATGTATCAGCGCTCAGCCGACATG--GGTCTTGGTGTACCATTTAACATTGC 2317287 Query 35695 ATCATACTCTCTTCTGAC 35712 |||||||| ||||| || Sbjct 2317288 CTCATACTCCCTTCTTAC 2317305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989575910769290