Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq426 95.1 9e-15 >seq426 Length=14042796 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 ||||||||||| || || ||| || |||||||| ||||| || ||| |||| Sbjct 4567566 AACACCAAATGAAGGGTCGACTCCTTCTGAATATTGTAATCTGCCAAGGTACGACCATCC 4567625 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 || | || ||||| || || ||||||| ||||||||| |||| | ||||| ||||| Sbjct 4567626 TCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 4567685 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||| || ||||| | ||| || || | || || |||| |||||||| Sbjct 4567686 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCAACCTCGAGGGTAATTGTC 4567745 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || ||||| | ||||||||| || || ||||| Sbjct 4567746 TTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 4567777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354774841382424