Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=11923138 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 19970 TTTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTAT 20028 ||||||||| |||| |||| | ||| ||||||| ||| || ||||| ||||| || || Sbjct 8290486 TTTTATCATGGTTCCACCTCTGAGCCTTAACACCAGATGAAGAGTAGACTCTTTCTGGAT 8290427 Query 20029 GTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTG 20088 ||||||||| | | ||| | |||||||| ||| || || ||| | || ||||| || Sbjct 8290426 GTTGTAATCCGCTAGGGTTCTTCCATCTTCCAGTTGCTTACCGGCAAATATCAGCCTTTG 8290367 Query 20089 TTGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | ||||||||||| Sbjct 8290366 CTGATCAGGTGGTATACCTTCTTTGTC 8290340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419583937447278