Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq105 529 2e-145 seq33 529 2e-145 seq426 455 4e-123 seq226 282 5e-71 seq498 127 2e-24 >seq105 Length=1758981 Score = 529 bits (586), Expect = 2e-145 Identities = 719/995 (72%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCG-CATCTACGTTGGTTGGTTTGGTGTCTT 170724 || ||| | ||| |||| |||||| || || ||| ||| |||| ||||||||||| || Sbjct 630872 TTCTGTAATTGGATAACCAGCACTGAAAACCGTCAT-TACATTGGATGGTTTGGTGTTTT 630814 Query 170725 AATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTC 170783 |||||||| | ||| | || || || | ||| ||| | |||||||| ||||||| Sbjct 630813 GATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTC 630755 Query 170784 CTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAAC 170842 ||||||| ||||| || || || | ||||| ||| | || ||| ||||| || || ||| Sbjct 630754 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAAC 630696 Query 170843 AACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCC 170902 || || || || ||||| | |||| |||| || || || || || || || || Sbjct 630695 AATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCT 630636 Query 170903 ATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTT 170962 ||||||||||| || | | || || ||| | |||||||| |||||||| | || || Sbjct 630635 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 630576 Query 170963 ATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATAC 171022 || | ||||| | |||| | || || |||||| | |||||||||| | | Sbjct 630575 GTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 630516 Query 171023 AGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTT 171082 | || || ||| | |||||||| ||| ||||| ||||| ||||| | || || | Sbjct 630515 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACT 630456 Query 171083 GCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGT 171142 || || ||| | | || ||| | ||||| || || |||||||||||||| ||||| Sbjct 630455 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 630396 Query 171143 ATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCAC 171202 ||||| ||||| |||||||| ||| | || ||||| || || |||||||| || |||||| Sbjct 630395 ATCTCTGGTACTTTCAACTTTATGATTGTCTTCCAGGCTGAGCACAACATTCTTATGCAC 630336 Query 171203 CCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCAC 171262 || || || ||| ||||||||| ||| | ||||| ||| || || ||||| ||||| Sbjct 630335 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCAT 630276 Query 171263 GGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTAC 171322 ||||| | || || ||| | | ||||| || || || || || || | || | Sbjct 630275 GGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 630216 Query 171323 GGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTC 171382 || || | ||||| |||||||||||||| || |||||||| ||||||||||| || || Sbjct 630215 GGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 630156 Query 171383 GGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTC 171442 || |||| |||||||| ||||| |||||||| |||||||| ||||| |||||| | Sbjct 630155 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 630096 Query 171443 GCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTC 171502 || | | || ||||| || | ||||| || || | ||||| | || ||||| ||| Sbjct 630095 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 630036 Query 171503 AACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCA 171562 || || || || ||||| |||||||||||||| || ||| | ||| || | Sbjct 630035 AATCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAAT 629976 Query 171563 ACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAAT 171622 || |||| ||| || ||||| | || |||||||| |||||||||||||||||| | ||| Sbjct 629975 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 629916 Query 171623 GCACACAACTTCCCACTAGACCTAGCATCTGCTGA 171657 || ||||||||||| ||||||||||| ||| ||| Sbjct 629915 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 629881 >seq33 Length=9343251 Score = 529 bits (586), Expect = 2e-145 Identities = 717/994 (72%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725 || ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| || Sbjct 3643555 TTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 3643614 Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784 |||||||| | ||| | || || || | ||| ||| | |||||||| |||||||| Sbjct 3643615 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 3643673 Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACA 170843 |||||| ||||| || || || | ||||| ||| | || ||| ||||| || || |||| Sbjct 3643674 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACA 3643732 Query 170844 ACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCA 170903 | || || || ||||| | |||| |||| || || || || || || || || | Sbjct 3643733 ATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCTA 3643792 Query 170904 TCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTA 170963 |||||||||| || | | || || ||| | |||||||| |||||||| | || || Sbjct 3643793 TCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTG 3643852 Query 170964 TTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACA 171023 || | ||||| | |||| | || || |||||| | |||||||||| | | Sbjct 3643853 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 3643912 Query 171024 GACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTG 171083 | || || ||| | |||||||| ||| ||||| ||||| ||||| | || || || Sbjct 3643913 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 3643972 Query 171084 CAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 171143 | || ||| | | || ||| | ||||| || || |||||||||||||| ||||| | Sbjct 3643973 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 3644032 Query 171144 TCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACC 171203 |||| ||||| |||||||| ||| | || ||||| || || |||||||| || ||||||| Sbjct 3644033 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 3644092 Query 171204 CCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACG 171263 | || || ||| ||||||||| ||| | ||||| ||| || || ||||| ||||| | Sbjct 3644093 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 3644152 Query 171264 GTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACG 171323 |||| | || || ||| | | ||||| || || || || || || | || | | Sbjct 3644153 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 3644212 Query 171324 GCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCG 171383 | || | ||||| |||||||||||||| || |||||||| ||||||||||| || || | Sbjct 3644213 GTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCATGGTTATTTTG 3644272 Query 171384 GTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCG 171443 | |||| |||||||| ||||| |||||||| |||||||| ||||| |||||| | | Sbjct 3644273 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 3644332 Query 171444 CTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 171503 | | | || ||||| || | ||||| || || | ||||| | || ||||| |||| Sbjct 3644333 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCA 3644392 Query 171504 ACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAA 171563 | || || || ||||| |||||||||||||| || ||| | ||| || | | Sbjct 3644393 ATCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 3644452 Query 171564 CATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATG 171623 | |||| ||| || ||||| | || |||||||| |||||||||||||||||| | |||| Sbjct 3644453 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 3644512 Query 171624 CACACAACTTCCCACTAGACCTAGCATCTGCTGA 171657 | ||||||||||| ||||||||||| ||| ||| Sbjct 3644513 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 3644546 >seq426 Length=14042796 Score = 455 bits (504), Expect = 4e-123 Identities = 631/878 (72%), Gaps = 4/878 (0%) Strand=Plus/Minus Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725 || ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| || Sbjct 7507479 TTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 7507420 Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784 |||||||| | ||| | || || || | ||| ||| | |||||||| |||||||| Sbjct 7507419 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 7507361 Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACA 170843 |||||| ||||| || || || | ||||| ||| | || ||| ||||| || || |||| Sbjct 7507360 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACA 7507302 Query 170844 ACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCA 170903 | || || || ||||| | |||| |||| || || || || || || || || | Sbjct 7507301 ATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCTA 7507242 Query 170904 TCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTA 170963 |||||||||| || | | || || ||| | |||||||| |||||||| | || || Sbjct 7507241 TCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTG 7507182 Query 170964 TTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACA 171023 || | ||||| | |||| | || || |||||| | |||||||||| | | Sbjct 7507181 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 7507122 Query 171024 GACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTG 171083 | || || ||| | |||||||| ||| ||||| ||||| ||||| | || || || Sbjct 7507121 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 7507062 Query 171084 CAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 171143 | || ||| | | || ||| | ||||| || || |||||||||||||| ||||| | Sbjct 7507061 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 7507002 Query 171144 TCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACC 171203 |||| ||||| |||||||| ||| | || ||||| || || |||||||| || ||||||| Sbjct 7507001 TCTCTGGTACTTTCAACTTTATGATTGTCTTCCAGGCTGAGCACAACATTCTTATGCACC 7506942 Query 171204 CCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACG 171263 | || || ||| ||||||||| ||| | ||||| ||| || || ||||| ||||| | Sbjct 7506941 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 7506882 Query 171264 GTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACG 171323 |||| | || || ||| | | ||||| || || || || || || | || | | Sbjct 7506881 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 7506822 Query 171324 GCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCG 171383 | || | ||||| |||||||||||||| || |||||||| ||||||||||| || || | Sbjct 7506821 GTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCATGGTTATTTTG 7506762 Query 171384 GTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCG 171443 | |||| |||||||| ||||| |||||||| |||||||| ||||| |||||| | | Sbjct 7506761 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 7506702 Query 171444 CTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 171503 | | | || ||||| || | ||||| || || | ||||| | || ||||| |||| Sbjct 7506701 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCA 7506642 Query 171504 ACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 171541 | || || || ||||| |||||||||||||| || ||| Sbjct 7506641 ATCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGAT 7506604 Score = 318 bits (352), Expect = 7e-82 Identities = 408/561 (73%), Gaps = 1/561 (0%) Strand=Plus/Plus Query 171098 TATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTC 171157 |||||| | ||||| || || |||||||||||||| ||||| ||||| ||||| ||| Sbjct 7485682 TATCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTC 7485741 Query 171158 AACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCA 171217 ||||| ||| | || ||||| || || |||||||| || |||||| | || || ||| | Sbjct 7485742 AACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACTCATTTCACATGTTA 7485801 Query 171218 GGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACA 171277 |||||||| ||| | ||||| | | || || ||||| ||||| ||| | | || || Sbjct 7485802 GGTGTAGCTGGTGTATTCGGCGATTCCCTATTTAGTGCTATGCATGGTACCTTGGTAACT 7485861 Query 171278 TCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGA 171337 ||| | | ||||| || || || | || || | || | || |||| ||||| Sbjct 7485862 TCTAATTTGATCAGGGAAACCACAAAAAATGAATCTGCTAATGAAGGTTATAGATTCGGT 7485921 Query 171338 CAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTC 171397 |||||||||||||| ||||||||||| |||||||||| || || || ||| |||||| Sbjct 7485922 CAAGAAGAAGAAACTTATAACATTGTATCTGCTCATGGTTATTTTGGCCAATTGATCTTC 7485981 Query 171398 CAGTATGCAT-CATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGT 171456 || ||||| | |||||||| |||||||| ||||| ||||| | || | | || || Sbjct 7485982 CAATATGCTTAGTTTCAACAATTCTCGTTCTTTACATTTCTTTTTAGCGGCTTGGCCAGT 7486041 Query 171457 AGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGATT 171516 | | || | ||||| || || | |||||| | || ||||| || || || || | || Sbjct 7486042 AATAGGTATTTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTTAATCTAAATAGTTT 7486101 Query 171517 CAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACATGGGGAGATGT 171576 ||| |||||||||||| | ||| | ||| || | || | || ||| | Sbjct 7486102 CAATCCCAACCAATCAGTAGGTGATAGTTAAGGACGTGTTATTAATACTTAGGCTGATAT 7486161 Query 171577 TCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCC 171636 | ||||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| Sbjct 7486162 TATTAACTGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCC 7486221 Query 171637 ACTAGACCTAGCATCTGCTGA 171657 ||||||||||| ||| ||| Sbjct 7486222 TCTAGACCTAGCTACTGTTGA 7486242 >seq226 Length=16133619 Score = 282 bits (312), Expect = 5e-71 Identities = 360/493 (73%), Gaps = 11/493 (2%) Strand=Plus/Minus Query 171173 TTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATG 171232 ||||| || || |||||||| || |||||||| || || ||| ||||||||| ||| | Sbjct 2917014 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 2916955 Query 171233 TTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGA 171292 ||||| || || || ||||| ||||| ||||| | || || ||| | | ||||| Sbjct 2916954 TTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGG 2916895 Query 171293 GAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACA 171352 || || || || || || | || | || || | ||||| |||||||||||||| Sbjct 2916894 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACT 2916835 Query 171353 TATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTC 171412 || |||||| | ||||||||||| || || || |||| ||||||| || ||| Sbjct 2916834 TACAACATTTTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCC-GT--------TTC 2916784 Query 171413 AACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTA 171472 || || |||||||| ||||| |||||| | || | | || ||||| || | ||||| Sbjct 2916783 AATAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 2916724 Query 171473 ACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCA 171532 || || | ||||| | || ||||| |||||||| || || ||||| |||||||||||| Sbjct 2916723 ACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 2916664 Query 171533 GTTGTAGAT-GCAAACGGAAAGATTGTACCAACATGGGGAGATGTTCTTAACAGAGCAAA 171591 || || ||| | || || | || | || |||| ||| || ||||| | || || Sbjct 2916663 GTAGTTGATAGTCAAGGGCGTG-TTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 2916605 Query 171592 CCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATC 171651 |||||| |||||||||||||||||| | ||||| ||||||||||| ||||||||||| | Sbjct 2916604 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 2916545 Query 171652 TGCTGAGTCTACA 171664 || |||| || || Sbjct 2916544 TGTTGAGGCTCCA 2916532 >seq498 Length=13441892 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 172219 TCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCG 172278 |||| ||||| |||||| ||||||| |||||||||| || ||| ||||||||| | Sbjct 9419765 TCTTCCTAATTTATCCACTAGGTCAATCGGGTTGGTTCTTTGCGCCTAGATTTGGTGTAG 9419824 Query 172279 CAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCAT 172338 |||| || ||||| | || |||| | || || || || ||| || | || ||| Sbjct 9419825 CAGCTATATTTCGATTCATCATATTTTTCCAAGGGTTTCATAATTGGACATTGAACTCAT 9419884 Query 172339 TTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTG 172398 ||||||||||||| || || ||| |||| || | || |||||||||| || ||||||| Sbjct 9419885 TTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTACTATGTGCTATTCATGGTG 9419944 Query 172399 CAACAGTACAGAACACATTGTATGAAGA 172426 | || ||| | || || || | |||||| Sbjct 9419945 CTACTGTAGAAAATACTTTATTTGAAGA 9419972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570264252106320