Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=21755756 Score = 100 bits (110), Expect = 3e-16 Identities = 189/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||| ||||| || || | || | ||||| || |||||||||||| || || Sbjct 2317330 ACCACAAACGTGAGCGAGGATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAATGGTAC 2317271 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 || | ||||||||| | || | |||||||| ||||| ||||| || || | || || Sbjct 2317270 ACCAAGACCCATGTCGGCTGAGCGCTGATACATTTGACATGAAAGTTCTCCATTTGCAAC 2317211 Query 20359 ATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418 || ||||| |||| ||| || || ||||| ||||||| | | || | || || Sbjct 2317210 GTAGAATTGTGCAAACATGTGGCATGGAGGAAGTGCCATCAGCTTAAGATCTGGAGGATT 2317151 Query 20419 CCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTA 20478 ||| || |||| || || | || ||| | ||||| || || || | | | | Sbjct 2317150 CCAAGCTGACATTATAATCCGTCGATCATCAGGATTGTTCTTGATCTTGTTGATTACATC 2317091 Query 20479 CGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT 20516 | ||| || ||||| || || || ||||| ||||||| Sbjct 2317090 CAACAGCTGATCAAATCCTTGCCCGGTATAATCAGCAT 2317053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369280051920