Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq98 154 3e-32 seq72 149 1e-30 seq154 145 2e-29 seq300 143 6e-29 seq25 107 5e-18 seq426 105 2e-17 seq365 96.9 8e-15 seq33 91.5 3e-13 >seq98 Length=1871237 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||| ||| || ||||| || ||||||||| Sbjct 1506738 CCACCACGGAGACGGAGGACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 1506679 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||||||||| || | || || || |||||||||| ||||| || ||| Sbjct 1506678 AGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCGCTGCTGGTCCGGAGGG 1506619 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || || || || || || || | |||| || || || Sbjct 1506618 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTATCGGAGGACTCGACC 1506559 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| |||||||| || || || || ||||| ||||||||| Sbjct 1506558 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATT 1506511 >seq72 Length=2765197 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||||| ||| || || || || || ||||||||| Sbjct 415983 CCACCACGAAGACGGAGCACGAGATGAAGCGTCGACTCCTTCTGTATGTTGTAGTCGGCG 416042 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | |||||||| ||||| |||| ||||| || |||| Sbjct 416043 AGTGTGCGCCCGTCTTCCAGCTGTTTTCCGGCGAATATCAATCGCTGCTGGTCCGGTGGG 416102 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| ||||||||||| || || || | || |||||| || Sbjct 416103 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTGTCTGACGATTCGACC 416162 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || || || || || || |||||||| Sbjct 416163 TCAAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 416209 >seq154 Length=17905225 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | |||| ||| ||| || ||||| || || ||||| Sbjct 1926096 CCACCACGGAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 1926155 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| || || ||||| |||||||| || | ||| ||| || Sbjct 1926156 AAAGTCCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 1926215 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| |||||||||||||| ||||| ||||| || || | || ||| ||| Sbjct 1926216 ATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTATCGATGGTGTCAGAGCT---TTCC 1926272 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||| || || |||||||| Sbjct 1926273 ACCTCGAGGGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1926322 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | |||| ||| ||| || ||||| || || ||||| Sbjct 1939362 CCACCACGGAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 1939421 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| || || ||||| |||||||| || | ||| ||| || Sbjct 1939422 AAAGTCCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 1939481 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| |||||||||||||| ||||| ||||| || || | || ||| ||| Sbjct 1939482 ATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTATCGATGGTGTCAGAGCT---TTCC 1939538 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||| || || |||||||| Sbjct 1939539 ACCTCGAGGGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1939588 Score = 132 bits (146), Expect = 1e-25 Identities = 149/197 (76%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || ||||| | ||||| || || || | || ||||| |||||| Sbjct 1925220 TCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAG 1925279 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||||| ||| ||||| || |||||||| |||||||| || || || ||| Sbjct 1925280 ATGAGACGCTGCTGA---TCTGGAGGAATCCCTTCTTTGTCCTGGATCTTGGCCTTGACG 1925336 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || ||||| || ||||| |||||||||||||| ||| Sbjct 1925337 TTGTCAATGGTGTCGGAGCTC---TCGACTTCAAGGGTGATGGTCTTCCCGGTCAGGGTC 1925393 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 1925394 TTGACGAAAATCTGCAT 1925410 Score = 123 bits (136), Expect = 6e-23 Identities = 147/197 (75%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || || || || || ||||| || || || | ||||| || |||||| Sbjct 1938486 TCTTTCTGAATGTTGTAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCGAAG 1938545 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||||| ||| |||||| || |||||||| || ||||| || || |||||| Sbjct 1938546 ATGAGACGCTGCTGA---TCTGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACG 1938602 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || || | ||||| ||||||||||||| ||| Sbjct 1938603 TTGTCAATGGTGTCGGAGCTC---TCAACCTCCAAAGTGATGGTCTTCCCGGTCAAGGTC 1938659 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 1938660 TTGACGAAAATCTGCAT 1938676 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || ||||||| || || || ||||| || ||||| || Sbjct 1925868 CCACCACGGAGCCTGAGCACTAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 1925927 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || ||||| |||||||||| | ||| || |||| Sbjct 1925928 AGAGTACGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGG 1925987 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 ||||| || || || ||||| || || |||||||| || || | || ||| || Sbjct 1925988 ATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAACTC---TCG 1926044 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||| || || || || |||||||| |||||||| Sbjct 1926045 ACCTCCAAAGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 1926094 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || ||||||| || || || ||||| || ||||| || Sbjct 1939134 CCACCACGGAGCCTGAGCACTAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 1939193 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || ||||| |||||||||| | ||| || |||| Sbjct 1939194 AGAGTACGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGG 1939253 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 ||||| || || || ||||| || || |||||||| || || | || ||| || Sbjct 1939254 ATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAACTC---TCG 1939310 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||| || || || || |||||||| |||||||| Sbjct 1939311 ACCTCCAAAGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 1939360 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || ||||| | |||||||| || || | || || || |||||| Sbjct 1938942 TCCTTCTGGATATTGTAATCGGCCAAGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAG 1939001 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || || |||||| ||||| || || || ||||| ||||||||||| Sbjct 1939002 ATCAACCTTTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGAATTTTGGCTTTCACGTTG 1939061 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | ||||| || || ||||||| ||| || Sbjct 1939062 TCGATGGTGTCAGAGCTC---TCGACCTCCAAAGTGATGGTTTTTCCGGTCAAAGTTTTC 1939118 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 1939119 ACGAAGATTTGCAT 1939132 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || ||||| | ||||| || || || | || || || |||||| Sbjct 1925676 TCCTTCTGGATATTGTAATCGGCCAAGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAG 1925735 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||||| ||||| || || || ||||| ||||||||||| Sbjct 1925736 ATCAACCTCTGCTGGTCCGGGGGGATACCTTCCTTGTCTTGAATTTTGGCTTTCACGTTG 1925795 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | || || ||||| ||||||| ||| || Sbjct 1925796 TCGATGGTGTCAGAGCTC---TCAACCTCCAAAGTAATGGTCTTTCCGGTCAAAGTTTTC 1925852 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 1925853 ACGAAGATTTGCAT 1925866 >seq300 Length=15655920 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| || ||||| || || || || || || | |||||||| ||||| Sbjct 7117933 TGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGCCAGTGTCCTCCCGTCTTCCAATTGC 7117992 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 ||||| ||||||||||| ||||| ||| ||||||||||| || |||||||| ||| Sbjct 7117993 TTTCCGGCGAAGATCAGTCGCTGCTGATCCGGCGGGATTCCTTCCTTGTCCTGGATCTTC 7118052 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || ||||| || || || | ||| ||||| || || || || ||||||||||| || Sbjct 7118053 GCCTTCACATTGTCGATCGTATCCGATGATTCAACCTCTAGTGTTATCGTCTTCCCCGTT 7118112 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| ||||||||| Sbjct 7118113 AGGGTTTTCACGAAAATCTGCATT 7118136 >seq25 Length=9441222 Score = 107 bits (118), Expect = 5e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || || |||| || ||||| || || || ||||| || Sbjct 6394258 TCCACCGCGGAGACGTAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCAGC 6394199 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || || || | || || || || ||||| || | ||| || | | Sbjct 6394198 TAAAGTCCGACCATCCTCGAGCTGCTTCCCGGCAAAGATTAGCCTCTGCTGGTCCGGTTG 6394139 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| |||||||| || || ||||| || ||||| || || || | || |||| || Sbjct 6394138 GATCCCTTCTTTGTCTTGAATTTTTGCCTTCACATTGTCAATGGTGTCTGAGCTC---TC 6394082 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || || ||||| ||||||||||||||||||||||| Sbjct 6394081 AACTTCTAGGGTAATGGTTTTACCGGTAAGAGTCTTGACGAATATCTGCAT 6394031 >seq426 Length=14042796 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || ||||||| || || || || || || ||||| ||| Sbjct 4568007 CCACCACGGAGCCTGAGGACTAGATGAAGGGTCGACTCCTTCTGTATGTTGTAGTCAGCG 4568066 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || ||||| || ||||||| | || || |||| Sbjct 4568067 AGAGTTCTACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGG 4568126 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 ||||| || || || ||||| || || || || || || || | ||| ||| || Sbjct 4568127 ATTCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTATCAGAACTC---TCC 4568183 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || || || |||||||| |||||||| Sbjct 4568184 ACCTCGAGTGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 4568233 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || || || || | || || || || || | || ||||| ||||| Sbjct 4567358 TTCCTTCTGAATGTTGTAATCCGCCAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAA 4567417 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||| || || ||||| |||||||| |||||||| || || || || || Sbjct 4567418 GATGAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATT 4567477 Query 288402 TTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | ||| ||| || ||||| || || |||||||| || || || ||||| Sbjct 4567478 GTCAATGGTGTCGGAGCTC---TCGACTTCAAGAGTAATCGTCTTGCCTGTAAGGGTCTT 4567534 Query 288459 GACGAATATCTGCAT 288473 |||||||||||||| Sbjct 4567535 CACGAATATCTGCAT 4567549 >seq365 Length=14695327 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/193 (72%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 268461 GTTTCCCATTCAATATCATGATCTGTGGAACATGTACAAGAAGGCAGTGGCAACCTTTTG 268520 |||||| |||||||| | | | ||| | |||||||||||||| | |||| | || || Sbjct 6185600 GTTTCCGATTCAATACCCACAGATCTGGGAGATGTACAAGAAGGCCGAGGCATCGTTCTG 6185659 Query 268521 GACCACCGAGGAAGTTCCTCTTAACGCA-GACGTTGCAGACTGGCGTGAGAAACTGAACA 268579 ||| | || ||||| ||| | | || |||| | |||||| ||||| || ||| Sbjct 6185660 GACGGCGGAAGAAGTCGATCT-ATCACAAGACGGTCGCGACTGG---GAGAATCTCAACG 6185715 Query 268580 ACGATGAACGACACTTCATCAAACATATTCTGGGGTTCTTTGCAGGCTCCGACGGTATCG 268639 ||| || ||||||||||||||||| | || | ||||| || | ||| ||||| |||| Sbjct 6185716 ACGGCGAGCGACACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCAGACGGAATCG 6185775 Query 268640 TGATGGAAAATCT 268652 | | || ||||| Sbjct 6185776 TCCTAGAGAATCT 6185788 >seq33 Length=9343251 Score = 91.5 bits (100), Expect = 3e-13 Identities = 162/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| | | ||| || || |||| || || ||||||||||| || || || Sbjct 3270471 TCCACCGCGCAAACGAAGGACAAGGTGAAGAGTTGACTCCTTTTGGATATTGTAATCAGC 3270530 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATC 288362 | || || || ||||| | |||||| || || || || || | |||| | || | Sbjct 3270531 CAAAGTACGACCATCTTCGAGTTGTTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGA-- 3270588 Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAAT---CGCTCGA 288419 | |||||||||||| |||||||| || || || || || || | | | ||| Sbjct 3270589 -GTGATTCCTTCTTTGTCCTGGATCTTAGCCTTGACATTGTCAACTGTGTTTGAGCT--- 3270644 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || || || ||||| || || |||||||| || || |||||||| Sbjct 3270645 TTCGACCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTTACAAAGATCTGCAT 3270698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179644757062564