Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq365 98.7 1e-15 >seq365 Length=14695327 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 || ||||| || ||||| | || || |||||| | || ||||||||||| || ||| Sbjct 6186151 CCTTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTTAATCCAGGCATGAGACCACGTTTC 6186092 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | ||||||||||| || || || ||||||||||| || || || || ||||| Sbjct 6186091 TTAAGCCAGAAAATCGAGCAGAAGCTACCGGAGAAGAAGATACCTTCGACGCAGGCGAAA 6186032 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGT 127717 || | | ||||| || || | | || | || | |||| ||||||||||||| Sbjct 6186031 GCGACGATTCGCTCTGCGAAAGTCTGAGA---TCCGTCGATCCACGTCATCGCCCACTGA 6185975 Query 127718 GCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 || || ||| ||| || |||| ||| | ||| || Sbjct 6185974 GCTTTCTTCGCGACGCAAGGGATGGTTTCGATTGC 6185940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502307280080