Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq300 174 1e-37 seq33 127 2e-23 seq25 114 1e-19 seq1 114 1e-19 seq81 105 5e-17 seq2 102 7e-16 seq154 93.3 3e-13 seq426 89.7 4e-12 >seq300 Length=15655920 Score = 174 bits (192), Expect = 1e-37 Identities = 549/847 (65%), Gaps = 8/847 (1%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 ||||| ||| ||||| || ||||| ||||||| |||| || ||||| ||||| Sbjct 9959032 GAAGAAGGTGTCTTTGAGGTGAAGGCTACAGCTGGAGATACTCACCTCGGTGGTGAAGAC 9959091 Query 551817 TTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTG 551874 ||||| || || || || | ||| | |||| || ||||| | || |||| | Sbjct 9959092 TTTGACAACAGGCTTGTGAACCAT--TTCGTTGCGGAGTTTAAGAGGAAGCACAAGAAGG 9959149 Query 551875 ATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAAC 551934 | | | ||| | || || | | || ||||| |||||||| ||||| || Sbjct 9959150 ACATTAGTGGGAATGCGAGGGCACTCAGGAGGCTGAGAACAGCTTGCGAGAGAGCAAAGA 9959209 Query 551935 GAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTG 551994 || | ||||| || | |||| || ||| |||| ||||||| || ||||| ||| Sbjct 9959210 GAACGCTTTCTTCCACTGCTCAGACGACTCTTGAGATAGATTCTTTGCACGAGGGTGTTG 9959269 Query 551995 ATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAA 552054 ||| | || | || || | || | ||||| || || ||||| || || | Sbjct 9959270 ATTTCTACGCGACGATCTCACGTGCGAGGTTTGAGGAGATGAACATGGATCTGTTCAGGA 9959329 Query 552055 AAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTAC 552114 || || || || || || |||| | |||||| | |||| ||| || || || | Sbjct 9959330 AATGTATGGATCCTGTGGAGAAAGTGCTTAGAGATGCTAAGACTGACAAGAGCAGTGTGC 9959389 Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAG 552172 | || | || |||||||||||||| || || ||||| ||||||| | | || ||| Sbjct 9959390 ACGAGGTGGTTCTTGTTGGTGGATCGACGAGGATTCCGAAAATTCAGCAGCTTTTGCAAG 9959449 Query 552173 TTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTA 552232 | | ||||| || || | || |||| | || || ||||| |||||||| || Sbjct 9959450 ATTTC--TTCAACGGGAAGGAGCTATGCAAAAGCATAAACCCTGATGAAGCTGTTGCTTA 9959507 Query 552233 TGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATAT 552292 ||| || || | || || || |||||| |||| || || || | ||| || | Sbjct 9959508 TGGAGCTGCGGTCCAGGCTGCGATTCTTACTGGTGAAGGAAGCGATAAGGTCCAAGATCT 9959567 Query 552293 TGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGAC 552352 | | ||| | ||||| | || ||| ||||| | || || | || || | ||||| Sbjct 9959568 TCTGCTTCTTGATGTGGCGCCGCTAAGCCTTGGACTTGAGACGGCCGGTGGGGTAATGAC 9959627 Query 552353 TAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTA 552412 | | ||| || || || || |||||||||| || | || || || ||||| Sbjct 9959628 TGTGTTAATCCCGAGGAACACGACGGTTCCTTGTAAGAAGGAGCAAGTGTTCTCCACGTA 9959687 Query 552413 TTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAA 552472 | | || ||||| | | ||| || ||| | | ||||||||| | | || || Sbjct 9959688 TGCGGACAATCAGCCAGGCGTTCTGATCCAAGTCTACGAAGGAGAACGTGCAAGGACCAA 9959747 Query 552473 AGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGT 552532 ||| || || | ||||| || ||| | | | || ||||||||||| || |||||||| Sbjct 9959748 AGACAACAACCTTCTTGGAACCTTTGAGCTCAAGGGCATTCCTCCTGCGCCACGTGGAGT 9959807 Query 552533 ACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTG 552592 || |||||| | ||| || || || || || ||||| ||||| |||||| | ||| Sbjct 9959808 TCCTCAAATTAATGTTTGCTTTGACATTGACGCGAATGGGATTTTAAATGTGTCGGCTGA 9959867 Query 552593 TGATAAA 552599 |||||| Sbjct 9959868 GGATAAA 9959874 Score = 93.3 bits (102), Expect = 3e-13 Identities = 362/557 (65%), Gaps = 19/557 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || || | || || ||||| ||||||||||| |||||| || | Sbjct 9958401 AGCTATTGGCATCGACCTCGGCACAACATACAGTTGTGTTGGGGTTTGGATGAACGACCG 9958460 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || ||| | || || ||||| ||| | || || || ||||| || | ||||| Sbjct 9958461 TGTGGAGATCATTCCTAACGACCAAGGAAACCGTACGACGCCGTCTTACGTCGCGTTCAC 9958520 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC-CA 550169 || || || | ||| | || |||||||| || |||| | | | | | || || || Sbjct 9958521 AGACACCGAGCGGTTAATCGGCGATGCAGCGAAGAATCAGGTGGC-GTTGAACCCACACA 9958579 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| | || ||||| |||||| | || || | || ||| ||| | |||||||| Sbjct 9958580 ACACTGTCTTCGATGCGAAACGTCTCATCGGTCGGAGATTTTCCGATCCTTCTGTTCAGA 9958639 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTG--GAAAACC---TTATAT 550284 |||||| || ||||| ||| | ||||| | | | | || || | | ||| Sbjct 9958640 GCGATATGCGACACTGGCCGTTCAAGGTTGTTTCCGGTCCCGGTGACAAGCCGATGATAG 9958699 Query 550285 TG--AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATG 550342 || | || || ||| || | || || || || || || | ||||| || ||| Sbjct 9958700 TGGTATCGTA--CAAGAACGA--AGAGAAGCAGTTCTCTCCTGAGGAGATTTCTTCGATG 9958755 Query 550343 GTTTTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAA--GTTACGGAT 550399 || |||| || ||||| || ||| ||| | || | || || | || | | Sbjct 9958756 GTGCTAATCAAGATGAAGGAAGTCGCCGAGT-CATTCCTAGG--GAGCACCGTCAAAAAC 9958812 Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || | || || || || || || || || || || | || || || || || || Sbjct 9958813 GCCGTCGTTACGGTCCCGGCGTACTTCAACGATTCTCAGAGACAGGCGACGAAGGACGCC 9958872 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| ||| |||| || || ||| | ||||| ||||| || || |||||||| || | Sbjct 9958873 GGATCGATTTCTGGGCTCAACGTTTTGCGTATAATCAACGAGCCGACTGCTGCAGCTATC 9958932 Query 550520 GCATATGGACTTGATAA 550536 || |||||| | || || Sbjct 9958933 GCTTATGGATTAGACAA 9958949 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 ||||| || ||| |||| || |||||| ||||||||||| | || || | ||| Sbjct 12650288 ATAGGGATCGATCTAGGGACTACATATTCATGTGTTGGTGTGTACCATAACAAACACGTT 12650347 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| || || || |||||||| ||||||| || ||||||| ||| | ||||| || Sbjct 12650348 GAAATCATAGCAAACGATCAAGGAAACAGAATCACACCATCTTGGGTTGCCTTCACTGAT 12650407 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC 550152 || |||| | | | || || || || || ||||||| Sbjct 12650408 ACGGAACGTCTCATAGGCGAGGCTGCTAAGAATCAAGC 12650445 >seq33 Length=9343251 Score = 127 bits (140), Expect = 2e-23 Identities = 169/232 (73%), Gaps = 16/232 (7%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||| || ||||| ||||| || ||| ||||| |||||||||||||| | ||| | Sbjct 3270483 ACGAAGGACAAGGTGAAGAGTTGACTCCTTTTGG--ATATTGTAATCAGCCAAAGTACGA 3270540 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||| Sbjct 3270541 CCATCTTCGAGTTGTTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGAGTGATTCCTTCT 3270600 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG------ 563430 || || || || || || || |||| ||| || |||| | |||| Sbjct 3270601 TTGTCCTGGATCTTAGCCTTGACATTGTCAACTGT----GTTTGAG--CTTTCGACCTCA 3270654 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATAGACATCT 563482 ||||| | || || ||||||||||| || || || || |||||| ||||| Sbjct 3270655 AGAGTTATGGTCTTGCCAGTAAGAGTCTTTACAAAGATCTGCATAACCATCT 3270706 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || |||||| |||||| | || || ||||| |||||||||||||| | ||||| | Sbjct 2252076 AGTTATAGGGATAGATCTTGGTACAACATACTCTTGTGTTGGTGTTTACAAGAATGGCCA 2252135 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||| ||||||||||| ||||| ||| | | ||| || || | ||| |||||| Sbjct 2252136 TGTTGAAATCATTGCCAATGACCAAGGAAACCGTATTACACCTTCCTGGGTTGGTTTCAC 2252195 Query 550111 GGA 550113 || Sbjct 2252196 CGA 2252198 >seq25 Length=9441222 Score = 114 bits (126), Expect = 1e-19 Identities = 146/198 (74%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 563280 ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGC 563339 ||| | ||||| ||| |||||||||| ||||| | ||| || || || || ||||| Sbjct 6393995 ACTCTTTTTGG--ATACTGTAATCAGCCAGAGTACGGCCATCCTCGAGCTGCTTCCCGGC 6393938 Query 563340 AAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTAC 563399 |||||||||||||||||| ||||||||||| |||||||||||||| || || || || Sbjct 6393937 AAAAATAAGTCTTTGCTGGTCAGGAGGAATACCTTCTTTATCTTGGATCTTGGCCTTGAC 6393878 Query 563400 TGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTT 563457 ||||| | || || | | || || || || | || || ||||||||||| Sbjct 6393877 ATTGTCAATGATGTC--TGAGCTTTCAACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTC 6393820 Query 563458 TTAACGAAAATTTGCATA 563475 || || || ||||||||| Sbjct 6393819 TTTACAAAGATTTGCATA 6393802 Score = 113 bits (124), Expect = 4e-19 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||| ||||| || ||||| ||| ||||| ||||||| ||| | Sbjct 6394249 GAGACGTAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCAGCTAAAGTCCG 6394190 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || || || || |||||||| || || || ||||| || || | || ||||| Sbjct 6394189 ACCATCCTCGAGCTGCTTCCCGGCAAAGATTAGCCTCTGCTGGTCCGGTTGGATCCCTTC 6394130 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| |||||||||||| || || ||||| || || | | | ||| || || Sbjct 6394129 TTTGTCTTGAATTTTTGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGT 6394070 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || |||||||| |||||||| || ||||| || |||||| Sbjct 6394069 AATGGTTTTACCGGTAAGAGTCTTGACGAATATCTGCATA 6394030 Score = 91.5 bits (100), Expect = 1e-12 Identities = 137/192 (71%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| ||| | || || || || ||| || || ||||||||| | | Sbjct 6495895 AGCTATTGGTATCGATCTCGGTACTACCTACTCTTGCGTCGGAGTTTGGCAACACGACCG 6495954 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||| || ||||| ||||||||||||||||| || || || || || || | ||||| Sbjct 6495955 TGTTGAGATCATTGCTAATGATCAAGGTAACAGGACGACGCCGTCCTACGTCGCCTTCAC 6496014 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTAC 550167 || | |||| ||| ||||||| || || || |||| |||| || ||||| | Sbjct 6496015 AGACAGCGAACGTTTGATTGGTGACGCCGCGAAGAATCAGGTGGCCA-TG--AATCCCAT 6496071 Query 550168 CAATACTATTTT 550179 ||| ||| |||| Sbjct 6496072 CAACACTGTTTT 6496083 >seq1 Length=21755756 Score = 114 bits (126), Expect = 1e-19 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 550386 AAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAG 550445 || |||| || | || || | |||||||| || || || || |||||||| | || Sbjct 6705155 AAAAAGTAACCAAGGCTGTCGTCACTGTACCTGCTTACTTCAACGACTCACAGAGGACAG 6705096 Query 550446 CTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTA 550505 |||| ||||||||||| || |||||||| || | |||||||||||||| ||||| || | Sbjct 6705095 CTACGAAAGATGCTGGTCGCATTGCTGGGCTGGAAGTTCTTCGTATTATTAATGAGCCCA 6705036 Query 550506 CTGCTGCTGCACTTGCATATGGACTTGA 550533 |||||||| || | || |||||| |||| Sbjct 6705035 CTGCTGCTTCATTGGCTTATGGATTTGA 6705008 Score = 95.1 bits (104), Expect = 1e-13 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||| || | || || || ||||| || || || || || ||||| || | ||||| Sbjct 6709180 AAGTAACCAAGGCTGTCATCACTGTGCCTGCTTACTTCAACGACTCTCAGAGGACAGCTA 6709121 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | ||||||||||| || |||||||| | | |||||||||||||||||||| || || | Sbjct 6709120 CGAAAGATGCTGGTCGCATTGCTGGGTTGGAAGTTCTTCGTATTATCAATGAGCCCACAG 6709061 Query 550509 CTGCTGCACTTGCATATGGACTTGA 550533 |||| || | || ||||| |||| Sbjct 6709060 CTGCGTCATTGGCTTATGGGTTTGA 6709036 Score = 86.0 bits (94), Expect = 5e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||| | ||| | |||||||||||||||||| || || | |||| || || || Sbjct 805413 ACCATATGATAAAGCAGCAGCTGTTGGTTCGTTGATGATCCTCTGGACATCAAGACCGGC 805354 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| ||||| |||||||| | ||||||||||| ||||| || |||||||| Sbjct 805353 GATTTTCCCAGCATCCTTTGTGGCTTGTCTCTGTGCATCATTGAAATAAGCTGGAACAGT 805294 Query 361825 AATCACTGCTTT 361836 || || ||||| Sbjct 805293 AACAACAGCTTT 805282 >seq81 Length=19988679 Score = 105 bits (116), Expect = 5e-17 Identities = 505/792 (64%), Gaps = 12/792 (2%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 |||||| | ||||||||||| |||||||| || || ||| |||| | || | |||| Sbjct 569354 TGGAGACACCCATCTTGGTGGAGAAGATTTCGACAACAGAATGGTCAACCAC--TTTGTT 569297 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 | || || || | || | ||| || | || | | | ||||||| | | Sbjct 569296 CAGGAATTCAAGAGGAAGAGCAAGAAGGACATTACTGGTAATCCAAGAGCTCTTAGGAGA 569237 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 | ||||||||||| || ||||| || | ||||||| || | ||||||| || || Sbjct 569236 TTGAGAACTGCTTGTGAGAGAGCGAAGAGGACTCTTTCCTCCACTGCTCAAACAACCATC 569177 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGA-TTATAATACGCCTATTTCGAGGGCCAAATT 552025 || | || || | | ||||| || || || || | | |||| | | || | ||| Sbjct 569176 GAGATTGACTCTCTGTACGAGGGCATCGACTTCTACT-CCACTATCACCCGTGCTAGATT 569118 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTAA 552084 ||| || | || ||||| ||||| || || ||||| ||| |||| | | Sbjct 569117 TGAGGAGCTCAACATGGACCTCTTCAGAAAGTGTATGGAGCCAGTCGAA-AAGTGTCTCC 569059 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 | ||| | ||||| || || || || || || |||| ||||||||||| || || Sbjct 569058 GTGATGCTAAGATGGACAAGAGCACCGTCCACGATGTTGTTCTTGTTGGTGGTTCCACCC 568999 Query 552145 GAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | || || || ||| || || | ||| ||| |||||||| || || | | Sbjct 568998 GTATCCCCAAGGTTCAGCAATTGCTCCAAG-ACTT-CTTCAATGGCAAGGAACTTTGCAA 568941 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | | || || |||||||| ||||| || ||||| || | || | |||||||| Sbjct 568940 ATCTATCAACCCCGATGAGGCCGTTGCTTACGGTGCAGCCGTCCAGGGCGCTATTCTCAG 568881 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 ||| || |||| || | ||| || || | | | ||||| |||||||| || || Sbjct 568880 TGGTGAAGGAAATGAGAAGGTCCAAGATCTTCTGTTGCTCGATGTCACTCCTCTCTCACT 568821 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 |||| | ||||| | || ||| | ||||| | |||||| ||||| || || || || Sbjct 568820 TGGTCTTGAAACCGCCGGTGGTGTCATGACCACCCTTATCCCGAGAAACACCACCATCCC 568761 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 || || | || || || || || ||||| || ||| | | ||| || || Sbjct 568760 AACCAAGAAGGAGCAGGTCTTCTCCACCTACTCAGACAACCAACCCGGTGTGCTGATCCA 568701 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTT 552502 | | | |||||||| || | || || || || || | || |||| || | | Sbjct 568700 AGTGTACGAAGGAGAGAGGGCAAGAACCAAGGACAACAACCTTCTGGGTAAGTTCGAGCT 568641 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 || || ||||| || || ||||| || || || || || ||||| ||||| Sbjct 568640 CTCTGGAATCCCTCCGGCCCCACGTGGTGTCCCTCAGATCACTGTCTGCTTCGACATCGA 568581 Query 552563 TGCCAATGGAAT 552574 ||| || || || Sbjct 568580 TGCTAACGGTAT 568569 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || |||||| |||||| | || || ||||| |||||||||||||| | ||||| | Sbjct 10506266 AGTTATAGGGATAGATCTTGGTACAACATACTCTTGTGTTGGTGTTTACAAGAATGGCCA 10506325 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||| ||||||||||| ||||| ||| | | ||| || || | ||| |||||| Sbjct 10506326 TGTTGAAATCATTGCCAATGACCAAGGAAACCGTATTACACCTTCCTGGGTTGGTTTCAC 10506385 Query 550111 GGA 550113 || Sbjct 10506386 CGA 10506388 Score = 86.0 bits (94), Expect = 5e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 || |||||| | |||||| |||| |||| || || | | | || || | ||| Sbjct 3018474 AAGATGAAAGAGACAGCCGAAGCTTACCTTGGGAAATCGGTGAAGAAAGCTGTTGTCACT 3018533 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || || || ||||| | || | ||||| || ||||||||||| | |||||| Sbjct 3018534 GTTCCTGCCTACTTCAATGATGCTCAGAGGCAAGCAACCAAAGATGCTGGTAGAATTGCT 3018593 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||| ||||| | ||||| || ||||| || |||||||| ||| | |||||| Sbjct 3018594 GGTCTTGATGTTGAGAGAATTATAAACGAACCGACGGCTGCTGCTCTTTCCTATGGA 3018650 >seq2 Length=11923138 Score = 102 bits (112), Expect = 7e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| ||| ||||| || |||||||| ||||| |||||| |||||| Sbjct 8290455 ACCAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCCGCTAGGGTTCTTCCATCTTCC 8290396 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||| || |||||||| || || |||||||||||||| || || |||||||| || || Sbjct 8290395 AGTTGCTTACCGGCAAATATCAGCCTTTGCTGATCAGGTGGTATACCTTCTTTGTCCTG 8290337 >seq154 Length=17905225 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| | ||| || | |||||||| ||| || || |||||||| || | ||| | Sbjct 1926104 GAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTCCG 1926163 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| | || |||||||| || ||||| || |||||||| |||||||||||||| Sbjct 1926164 GCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCCTTC 1926223 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAG 563434 ||||| || ||||| ||| || || || || |||| | | || ||||| | Sbjct 1926224 CTTATCCTGGATTTTGGCTTTAACGTTATCGATGGTGTCAGAGCTTTCCAC-CTCGAGGG 1926282 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | ||| || || || ||||| ||||| || || ||||| Sbjct 1926283 TGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1926322 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| | ||| || | |||||||| ||| || || |||||||| || | ||| | Sbjct 1939370 GAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTCCG 1939429 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| | || |||||||| || ||||| || |||||||| |||||||||||||| Sbjct 1939430 GCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCCTTC 1939489 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAG 563434 ||||| || ||||| ||| || || || || |||| | | || ||||| | Sbjct 1939490 CTTATCCTGGATTTTGGCTTTAACGTTATCGATGGTGTCAGAGCTTTCCAC-CTCGAGGG 1939548 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | ||| || || || ||||| ||||| || || ||||| Sbjct 1939549 TGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1939588 >seq426 Length=14042796 Score = 89.7 bits (98), Expect = 4e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | || | ||||||||| || || |||||||||||| || | || | Sbjct 4567560 AGACGCAACACCAAATGAAGGGTCGACTCCTTCTGAATATTGTAATCTGCCAAGGTACGA 4567619 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| ||||| || |||||||| || || | || ||||| || ||||| || ||||| Sbjct 4567620 CCATCCTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCC 4567679 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 ||||| ||||| || || || ||||| || |||| | | ||||| ||| Sbjct 4567680 TTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCAACCTCGAGGGTA 4567739 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || || |||||||| || ||||| || |||||| Sbjct 4567740 ATTGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCATA 4567778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029262259682620