Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05]
638 sequences; 243,110,105 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq570 98.7 2e-15
>seq570
Length=12873599
Score = 98.7 bits (108), Expect = 2e-15
Identities = 145/199 (73%), Gaps = 6/199 (3%)
Strand=Plus/Plus
Query 150364 GATTCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGT 150421
||||||||| | | ||| || || ||| |||| ||| |||| |||||||| |||||
Sbjct 2735219 GATTCTTTCAAGAAGAACAAAGAACAATCCAGTGC-TTA-TTGGAGAACCAGGAGTTGGG 2735276
Query 150422 AAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCT 150481
|||||| | ||||| || ||||||||| | || | || || |||||||| | |
Sbjct 2735277 AAAACAGCTGTTGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCCAACAGT 2735336
Query 150482 ATGAAAGATGTTGAAATTC-TTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTA 150540
| | ||||| || ||| |||||||| | ||||||||||| ||||||| |||| ||
Sbjct 2735337 CTTACTGATGT-GAGATTGATTTCTTTGGACATGGGTGCATTAGTTGCTGGTGCTAAATA 2735395
Query 150541 TCGTGGTGAATTCGAAGAA 150559
|| || || || ||||||
Sbjct 2735396 CCGAGGAGAGTTTGAAGAA 2735414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147581019165724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |