Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq570 98.7 2e-15 >seq570 Length=12873599 Score = 98.7 bits (108), Expect = 2e-15 Identities = 145/199 (73%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 150364 GATTCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGT 150421 ||||||||| | | ||| || || ||| |||| ||| |||| |||||||| ||||| Sbjct 2735219 GATTCTTTCAAGAAGAACAAAGAACAATCCAGTGC-TTA-TTGGAGAACCAGGAGTTGGG 2735276 Query 150422 AAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCT 150481 |||||| | ||||| || ||||||||| | || | || || |||||||| | | Sbjct 2735277 AAAACAGCTGTTGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCCAACAGT 2735336 Query 150482 ATGAAAGATGTTGAAATTC-TTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTA 150540 | | ||||| || ||| |||||||| | ||||||||||| ||||||| |||| || Sbjct 2735337 CTTACTGATGT-GAGATTGATTTCTTTGGACATGGGTGCATTAGTTGCTGGTGCTAAATA 2735395 Query 150541 TCGTGGTGAATTCGAAGAA 150559 || || || || |||||| Sbjct 2735396 CCGAGGAGAGTTTGAAGAA 2735414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147581019165724