Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq300 82.4 6e-11 >seq300 Length=15655920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||||||||| || || || ||||| ||||||| || || || || || ||| | Sbjct 7118139 AAAAATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACGATAACACTAGAGGTTGAATC 7118080 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || ||| | | | || | ||| || ||| ||||| || ||| | || || Sbjct 7118079 ATCGGATACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCGCCGGA 7118020 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||| ||| |||| ||||| || || || ||||||||||| | || |||| ||||| Sbjct 7118019 TCAGCAGCGACTGATCTTCGCCGGAAAGCAATTGGAAGACGGGAGGACACTGGCGGATTA 7117960 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || ||||| || || ||| |||| Sbjct 7117959 CAACATCCAGAAGGAATCGACGCTTCACTTGGT 7117927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425401492211802