Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 9e-11 >seq9 Length=11574597 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 |||||| || | |||| | || || || |||||| || ||||| || || || || || Sbjct 3599954 CACGTGAGCTAGCATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAG 3599895 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 |||||||||| | || | ||| |||| || || |||||||| || || ||||| || || Sbjct 3599894 GCCCATGTCCGCAGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCCACATAGAA 3599835 Query 147114 CTG 147116 ||| Sbjct 3599834 CTG 3599832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583483346683200