Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 6e-11 >seq9 Length=11574597 Score = 82.4 bits (90), Expect = 6e-11 Identities = 128/182 (70%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 111730 TAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGT 111789 || ||||| ||||| || ||| |||||| || || | ||| | | | || | ||| Sbjct 3600007 TACACATGAGCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGTGA 3599948 Query 111790 GCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATA 111849 || | |||| | || || ||| ||| |||||||||||| |||||||| |||||||| Sbjct 3599947 GCTAGCATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGGCCCATG 3599888 Query 111850 TCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAA 111909 || | || | ||||| | |||||||| || | || || |||||| || || ||| Sbjct 3599887 TCCGCAGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCCACATAGAACTG-CAA 3599829 Query 111910 AG 111911 || Sbjct 3599828 AG 3599827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391942552377994