Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 5e-12 >seq9 Length=11574597 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 29951 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 30010 |||||||| | |||| | || || ||||||||| || |||||||| || || || || Sbjct 3599953 ACGTGAGCTAGCATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGG 3599894 Query 30011 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 30070 ||||||||| | || | ||| || | ||||| ||||||||||| || ||| || ||| Sbjct 3599893 CCCATGTCCGCAGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCCACATAGAAC 3599834 Query 30071 TG 30072 || Sbjct 3599833 TG 3599832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307240682696