Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05]
638 sequences; 243,110,105 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq154 212 1e-49
seq426 203 8e-47
seq33 176 1e-38
seq300 167 5e-36
seq98 167 5e-36
seq25 167 5e-36
seq72 154 3e-32
seq2 118 2e-21
seq365 87.8 4e-12
>seq154
Length=17905225
Score = 212 bits (234), Expect = 1e-49
Identities = 180/222 (81%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || ||||| | |||||| ||||| || || |||||||| ||||| || | ||
Sbjct 1926101 ACGGAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGT 1926160
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || ||||||| |||||| || ||||||||||| | || || || ||||||| |||
Sbjct 1926161 CCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCC 1926220
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| |||||||| || ||| ||||| |||||||||||||||||||| ||||||||
Sbjct 1926221 TTCCTTATCCTGGATTTTGGCTTTAACGTTATCGATGGTGTCAGAGCTTTCCACCTCGAG 1926280
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||||||||| ||||| | ||||||
Sbjct 1926281 GGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1926322
Score = 212 bits (234), Expect = 1e-49
Identities = 180/222 (81%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || ||||| | |||||| ||||| || || |||||||| ||||| || | ||
Sbjct 1939367 ACGGAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGT 1939426
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || ||||||| |||||| || ||||||||||| | || || || ||||||| |||
Sbjct 1939427 CCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCC 1939486
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| |||||||| || ||| ||||| |||||||||||||||||||| ||||||||
Sbjct 1939487 TTCCTTATCCTGGATTTTGGCTTTAACGTTATCGATGGTGTCAGAGCTTTCCACCTCGAG 1939546
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||||||||| ||||| | ||||||
Sbjct 1939547 GGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1939588
Score = 203 bits (224), Expect = 8e-47
Identities = 178/222 (80%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || ||||| | ||||||||||||||| || || ||||| ||||| || | |||
Sbjct 1925417 ACGGAGCCTGAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGCCAAGGT 1925476
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| || || || ||||| ||||| | ||
Sbjct 1925477 GCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACC 1925536
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| |||||||| |||||||| || ||||| |||||||| ||
Sbjct 1925537 TTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTATCGGAGCTCTCAACCTCCAG 1925596
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || |||||||| ||||| | ||||||
Sbjct 1925597 TGTGATTGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCAT 1925638
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || || || || ||||| || ||||| || |||||||| || |||||||| ||
Sbjct 1925873 ACGGAGCCTGAGCACTAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGAGT 1925932
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| |||||||| || |||||||| | | || ||||| || || | |||
Sbjct 1925933 ACGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCC 1925992
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| |||||||| |||||||| |||||||||||||| || || ||||| |
Sbjct 1925993 CTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAACTCTCGACCTCCAA 1926052
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||||||||||||| || || || || || | ||||||
Sbjct 1926053 AGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 1926094
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || || || || ||||| || ||||| || |||||||| || |||||||| ||
Sbjct 1939139 ACGGAGCCTGAGCACTAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGAGT 1939198
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| |||||||| || |||||||| | | || ||||| || || | |||
Sbjct 1939199 ACGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCC 1939258
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| |||||||| |||||||| |||||||||||||| || || ||||| |
Sbjct 1939259 CTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAACTCTCGACCTCCAA 1939318
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||||||||||||| || || || || || | ||||||
Sbjct 1939319 AGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 1939360
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | ||||||||| ||||| || |||||||| ||||| || | |||
Sbjct 1925189 ACGAAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGT 1925248
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| || || || || || ||||||| ||
Sbjct 1925249 GCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGAATCCC 1925308
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||| |||||||||||||| || ||||| || |||||||| ||||| || || || ||
Sbjct 1925309 TTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCGACTTCAAG 1925368
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || ||||| || || | ||||||
Sbjct 1925369 GGTGATGGTCTTCCCGGTCAGGGTCTTGACGAAAATCTGCAT 1925410
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | |||||| || ||||| || || ||||| ||||| || | ||
Sbjct 1938683 ACGAAGACGGAGGACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGT 1938742
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| || || || || || || || | ||
Sbjct 1938743 GCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCC 1938802
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| |||||||| || || ||||||||||| || || || ||
Sbjct 1938803 TTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCGACTTCAAG 1938862
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||||||||| ||||| | |||||
Sbjct 1938863 GGTGATTGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 1938904
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | ||| | |||||| || ||||| || ||||| || ||||| || | |||
Sbjct 1925645 ACGAAGACGCAAGACCAAGTGAAGTGTTGACTCCTTCTGGATATTGTAATCGGCCAAGGT 1925704
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| |||||||| | | || ||||| || || | ||
Sbjct 1925705 GCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATACC 1925764
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| || || || ||||||||| ||||||||||||||||| |||||||| |
Sbjct 1925765 TTCCTTGTCTTGAATTTTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCAACCTCCAA 1925824
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| || | ||| || || || | |||||
Sbjct 1925825 AGTAATGGTCTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 1925866
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || | |||||| || ||||| || ||||| || ||||| || | |||
Sbjct 1938911 ACGAAGACGCAAAACCAAGTGAAGTGTTGACTCCTTCTGGATATTGTAATCGGCCAAGGT 1938970
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||| || ||||||||||| |||||||| | | ||| ||||| || || | ||
Sbjct 1938971 GCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCCGGTGGGATACC 1939030
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| || || || ||||||||| ||||||||||||||||| || ||||| |
Sbjct 1939031 TTCCTTGTCTTGAATTTTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAA 1939090
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| || ||||| || | ||| || || || | |||||
Sbjct 1939091 AGTGATGGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 1939132
>seq426
Length=14042796
Score = 203 bits (224), Expect = 8e-47
Identities = 178/222 (80%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || ||||| | ||| || ||||| || || |||||||| ||||| || | |||
Sbjct 4568240 ACGGAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGT 4568299
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| ||||||||||||||||| || ||||||||||| | ||| || || || || | |||
Sbjct 4568300 CCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGTGGGATTCC 4568359
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| |||||| ||| ||||| ||||| ||||| |||||||| ||||| ||
Sbjct 4568360 CTCCTTATCCTGAATCTTTGCTTTAACGTTATCGATCGTGTCGGAGCTTTCCACCTCAAG 4568419
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||||||||| || || | ||||||
Sbjct 4568420 GGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 4568461
Score = 188 bits (208), Expect = 2e-42
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||| || ||||| || || ||||| ||||| ||||| ||
Sbjct 4567100 ACGAAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCAAGTGT 4567159
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| || || || ||||| ||||| | ||
Sbjct 4567160 GCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCC 4567219
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| |||||||| || ||||| || |||||||||||||| || ||||||||
Sbjct 4567220 TTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACCTCGAG 4567279
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| ||||| ||||| ||||| | ||||||
Sbjct 4567280 GGTAATTGTCTTTCCGGTGAGTGTCTTCACAAAGATCTGCAT 4567321
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || || || || || ||||| |||||||| | ||| | |||||
Sbjct 4567338 AGAACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAATCCGCCAAGGTACGACCATCC 4567397
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || ||||| ||||| ||||| | ||||| ||||||
Sbjct 4567398 TCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCC 4567457
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| ||||| || || || ||||| ||||||
Sbjct 4567458 TGGATCTTAGCCTTGACATTGTCAATGGTGTCGGAGCTCTCGACTTCAAGAGTAATCGTC 4567517
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 4567518 TTGCCTGTAAGGGTCTTCACGAATATCTGCAT 4567549
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || ||||| || ||||| || ||||| || || ||||| || || || || ||
Sbjct 4568012 ACGGAGCCTGAGGACTAGATGAAGGGTCGACTCCTTCTGTATGTTGTAGTCAGCGAGAGT 4568071
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || || || |||||||| || || ||||| | | ||| ||||| || || | |||
Sbjct 4568072 TCTACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATTCC 4568131
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| |||||||| || || || |||||||| ||||| || || ||||||||
Sbjct 4568132 CTCCTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTATCAGAACTCTCCACCTCGAG 4568191
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||||||||| || || || || || | ||||||
Sbjct 4568192 TGTGATCGTCTTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 4568233
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| || ||||| || || || || ||||| || | ||| | ||||| || ||||||
Sbjct 4567575 TGAAGGGTCGACTCCTTCTGAATATTGTAATCTGCCAAGGTACGACCATCCTCAAGCTGC 4567634
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| | | || ||||| ||||| | |||||||| ||||| |||||
Sbjct 4567635 TTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGAATCTTG 4567694
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| || |||||||||||||||||||||||||| || || ||||| || ||
Sbjct 4567695 GCCTTGACGTTGTCAATGGTGTCAGAGCTTTCAACCTCGAGGGTAATTGTCTTGCCGGTA 4567754
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|||||||| || || | ||||||
Sbjct 4567755 AGAGTCTTCACGAAGATCTGCAT 4567777
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || |||||||| || ||||| ||||| || || || | |||||
Sbjct 4567794 AGAACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCTAGTGTACGACCATCC 4567853
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| | | ||| ||||| || || | ||| |||||||||
Sbjct 4567854 TCGAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 4567913
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| || || || ||||| | |||||| ||
Sbjct 4567914 TGGATCTTAGCCTTAACGTTGTCAATAGTGTCCGAACTCTCGACCTCCAAAGTGATGGTT 4567973
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | ||| || || || | ||||||
Sbjct 4567974 TTTCCAGTCAAAGTTTTAACGAAGATCTGCAT 4568005
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983
|| || | |||||| || || || | ||| ||||| || ||||| ||||| ||| |
Sbjct 791429 TCCTTGTTGATGTTGTAGTCAGCCAATATCCGACCATCCTCAAGCTGTTTGCCAGCGTAA 791370
Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTT 211043
| || | || ||||| || |||| || || || ||||||||||| || |||||
Sbjct 791369 AGCAGCCTCTGCTGGTCCGGCGGAATGCCCTCTTTATCCTGGATCTTGGCCTTAACGTTG 791310
Query 211044 TCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||||||| ||||||| |||| | ||||| ||||| || || | |||||| |||
Sbjct 791309 TCGATGGTGTCACAGCTTTCCACCTTTAAGGTGATGGTCTTCCCTGTCAAAGTCTTAACA 791250
Query 211104 AACACCTGCAT 211114
|| | ||||||
Sbjct 791249 AAAATCTGCAT 791239
>seq33
Length=9343251
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||||||||| ||||| |||||||| || ||||| || | || | ||||||
Sbjct 3270487 AGGACAAGGTGAAGAGTTGACTCCTTTTGGATATTGTAATCAGCCAAAGTACGACCATCT 3270546
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || || || || || || ||||| | ||| |||||||||| | |||||| ||||||
Sbjct 3270547 TCGAGTTGTTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGAGTGATTCCTTCTTTGTCC 3270606
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || | |||| |||||||| ||||| ||||| || |||
Sbjct 3270607 TGGATCTTAGCCTTGACATTGTCAACTGTGTTTGAGCTTTCGACCTCAAGAGTTATGGTC 3270666
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||||||||| | ||||||
Sbjct 3270667 TTGCCAGTAAGAGTCTTTACAAAGATCTGCAT 3270698
>seq300
Length=15655920
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || || || || |||||||| |||||||| || ||||| || |||
Sbjct 7117924 AGAACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGCCAGTGTCCTCCCGTCT 7117983
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||| || |||||||| || || || || || || || | |||||||||||||
Sbjct 7117984 TCCAATTGCTTTCCGGCGAAGATCAGTCGCTGCTGATCCGGCGGGATTCCTTCCTTGTCC 7118043
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| || || || ||||||||| || || ||||||
Sbjct 7118044 TGGATCTTCGCCTTCACATTGTCGATCGTATCCGATGATTCAACCTCTAGTGTTATCGTC 7118103
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || || || || || | |||||||||
Sbjct 7118104 TTCCCCGTTAGGGTTTTCACGAAAATCTGCATTTT 7118138
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
|| || ||||||||||||||||||||||||||||| || ||||||| | ||| | | |
Sbjct 11138747 CTCCCGAAGAAGCACGGAAGAGGAGGACAATCTGCGCTTCGTTTTGCTCGTCTTAGGATG 11138806
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA- 139925
|| ||||| |||||||| | || ||| ||||||| || | ||||| || |||||
Sbjct 11138807 GAGAAGAGACACAACTATGTTAGGAAAACTGCAGAGCTTGCTACACAGTTTTACATCAAT 11138866
Query 139926 --AGACAACAAGT----GTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAA 139979
|| | |||||| | ||| ||||| | | | || ||||| || || |||||
Sbjct 11138867 CCAG-CTACAAGTCAGCCTAATGTCGCTGGTCTGATCCTTGCTGGTTCAGCTGATTTCAA 11138925
Query 139980 GACAAAGCTCCTGGAATCTGACTTTTTTGACCC 140012
||| ||||| | || || || ||||| ||
Sbjct 11138926 GACTGAGCTCAGCCAGTCAGAGTTGTTTGATCC 11138958
>seq98
Length=1871237
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| || || || || |||||||| || || || ||||| | ||| ||
Sbjct 1506723 AGGACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 1506664
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| | || || ||||| ||||| | |||||||||||||
Sbjct 1506663 TCGAGCTGCTTCCCGGCGAAGATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 1506604
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| || || ||| || |||||||| ||||| |||
Sbjct 1506603 TGGATCTTGGCCTTGACATTGTCGATCGTATCGGAGGACTCGACCTCGAGGGTGATTGTC 1506544
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || || || || || | |||||||||
Sbjct 1506543 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 1506509
>seq25
Length=9441222
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959
|| || || | ||| ||||| |||||||||||||| | ||||| || || || | |||
Sbjct 6394017 CTGAGAACCAAGTGGAGAGTTGACTCTTTTTGGATACTGTAATCAGCCAGAGTACGGCCA 6393958
Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019
|| || |||||||| || || || ||||| | ||| ||||||||||||| ||||| ||
Sbjct 6393957 TCCTCGAGCTGCTTCCCGGCAAAAATAAGTCTTTGCTGGTCAGGAGGAATACCTTCTTTA 6393898
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079
|| |||||||| || || || || ||| |||| |||||||||||||| || || ||
Sbjct 6393897 TCTTGGATCTTGGCCTTGACATTGTCAATGATGTCTGAGCTTTCAACCTCAAGGGTTATG 6393838
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || |||||||||||||| | |||||
Sbjct 6393837 GTCTTGCCAGTAAGAGTCTTTACAAAGATTTGCAT 6393803
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| || | ||| |||||||||||||| |||||||| || ||||| || || || | |||
Sbjct 6394251 CGGAGACGTAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCAGCTAAAGTC 6394192
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || |||||||| || || ||||| || | || ||||| || | | |||
Sbjct 6394191 CGACCATCCTCGAGCTGCTTCCCGGCAAAGATTAGCCTCTGCTGGTCCGGTTGGATCCCT 6394132
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||| || || ||| ||||| || || |||||||| ||||| ||||| || ||
Sbjct 6394131 TCTTTGTCTTGAATTTTTGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGG 6394072
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || |||||||| || || | ||||||
Sbjct 6394071 GTAATGGTTTTACCGGTAAGAGTCTTGACGAATATCTGCAT 6394031
Score = 123 bits (136), Expect = 6e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959
|| || || | ||| || || |||||| ||||||| | ||||| || | || | |||
Sbjct 6393789 CTGAGAACCAAGTGGAGGGTAGACTCTCTTTGGATATCGTAATCAGCCAAAGTACGGCCA 6393730
Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019
|| || ||||| || || | ||||| || | ||||||||| |||||| |||||| ||
Sbjct 6393729 TCCTCTAGCTGTTTACCGGAAAAGATGAGCCTTTGTTGGTCCAGAGGAATTCCTTCTTTC 6393670
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079
||||| |||||| || || || ||||| ||||| ||||||||||| || || || ||
Sbjct 6393669 TCCTGTATCTTTGCCTTGACTTTATCGATTGTGTCTGAGCTTTCAACGTCAAGGGTTATG 6393610
Query 211080 GTCTTTCCCGTGAGAGTCTTT 211100
|| ||| | |||||||||
Sbjct 6393609 GTTTTTTCTTGAAGAGTCTTT 6393589
>seq72
Length=2765197
Score = 154 bits (170), Expect = 3e-32
Identities = 169/225 (75%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || || ||||| || ||||| || || ||||| || || || || ||
Sbjct 415988 ACGAAGACGGAGCACGAGATGAAGCGTCGACTCCTTCTGTATGTTGTAGTCGGCGAGTGT 416047
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || ||||||||||| || || ||||| || | || || ||||| || || | |||
Sbjct 416048 GCGCCCGTCTTCCAGCTGTTTTCCGGCGAATATCAATCGCTGCTGGTCCGGTGGGATTCC 416107
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| |||||||| |||||| || ||||||||||| || ||| ||||| ||
Sbjct 416108 TTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTGTCTGACGATTCGACCTCAAG 416167
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| ||||| || || || ||||| | |||||| ||
Sbjct 416168 GGTTATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATCTT 416212
>seq2
Length=11923138
Score = 118 bits (130), Expect = 2e-21
Identities = 103/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| |||| || || |||||||| |||||||| |||||||| |||||||| ||||| |||
Sbjct 8290464 AGCCTTAACACCAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCCGCTAGGGTTCTT 8290405
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||||||||| ||||| || || || || || | ||| || ||||| || | |||||
Sbjct 8290404 CCATCTTCCAGTTGCTTACCGGCAAATATCAGCCTTTGCTGATCAGGTGGTATACCTTCT 8290345
Query 211017 TTGTCCTG 211024
||||||||
Sbjct 8290344 TTGTCCTG 8290337
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
||||| |||||||||||||| || || || ||||| ||||| ||| || ||||||
Sbjct 8544282 CCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGAGGACTCGACCTCG 8544223
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || ||||| || ||||| || || ||||| | |||||| ||
Sbjct 8544222 AGAGTTATGGTCTTGCCAGTGAGTGTTTTCACAAAAATCTGCATCTT 8544176
>seq365
Length=14695327
Score = 87.8 bits (96), Expect = 4e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
||||| ||||||||||||||||||||||||||||| || || |||| | ||| | | |
Sbjct 6342811 CTTCCTAAGAAGCACGGAAGAGGAGGACAATCTGCGCTACGGTTTGCTCGTCTTAGGATG 6342752
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAG 139902
|| ||||| || |||||| |||| ||| ||||||
Sbjct 6342751 GAGAAGAGACATAACTACGTGAGGAAAACAGCAGAG 6342716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159142524656870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |