Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutrema_20salsugineum_20[refseq_20GCF_5F000478725.1_202013-11-05] 638 sequences; 243,110,105 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 1e-12 >seq9 Length=11574597 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 29667 GGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGT 29726 |||| || |||||||| || | |||| ||| || || || | || | |||| Sbjct 3600009 GGTACACATGAGCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGT 3599950 Query 29727 GAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCA 29786 |||| | |||| | || || ||||||||| || |||||||| ||||| || || |||| Sbjct 3599949 GAGCTAGCATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGGCCCA 3599890 Query 29787 TGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29844 ||||| | || | ||| || | || || ||||||||||| || ||| || ||||| Sbjct 3599889 TGTCCGCAGAACGCTGATACATTTGACATGAGAGCTCTCCTTCTGCCACATAGAACTG 3599832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406160041827268