Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4197 125 7e-24
>seq4197
Length=36674
Score = 125 bits (138), Expect = 7e-24
Identities = 234/333 (70%), Gaps = 12/333 (4%)
Strand=Plus/Plus
Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855
|||||||| ||||| ||||| ||||||| ||| | | | |||||| ||||| | |||
Sbjct 23252 CTATCCGCCACAAACTCTATGTATTGGCTCATGAGCACACCGTTCATCCCTATCA-ACGC 23310
Query 16856 ACCGGA-AGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAA-TAATA 16912
| || || || || || || || | |||||| | ||||||||||| | || |
Sbjct 23311 GCAGGGCAGCGCGTCGCACACGAACTCCCT-CTCTATCTCCACCGCTTCCTTTACTATTC 23369
Query 16913 CTAGCAACTCGTTCCTC-GGACGGTGTATGTT--TAAGATGTTTAAACATCAGACATGCG 16969
|| | ||| |||||||| ||| | | |||| | || | | | || ||||| |||
Sbjct 23370 CTTG-AACCCGTTCCTCCGGAAGCT---TGTTCCTCAGTAACTCATAGATGAGACAAGCG 23425
Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029
|||||||| || || || ||||| | | ||| | ||||| || || || | || |||
Sbjct 23426 AAATCGCAGTGCAAGCCTTCGTCGCGGGAGATCAACTCGTTCGAGAAGGTTAGTCCAGGC 23485
Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089
||| |||||| || |||| ||||||||||||| ||| ||||| ||||| |||||
Sbjct 23486 ATCAGTCCTCGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCAGAGAAGAAGATACCT 23545
Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122
|| ||| | ||||| || | || || || |||
Sbjct 23546 TCAACGCAGGCAAAAGCAACTATGCGCTCAGCG 23578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515038130383920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |