Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq35801 84.2 2e-11 >seq35801 Length=5147 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||||||||| || || | || | || || || || || || || || Sbjct 320 TCCTTCTGAATGTTGTAATCAGCCAATGTCCGTCCATCCTCGAGCTGCTTCCCAGCAAAG 261 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||||| ||| ||||| || || | |||||||||||| ||| || ||| || Sbjct 260 ATCAACCTCTGCTGGTCTGGCGGAATCCCCTCCTTGTCCTGAATCTTCGCCTTGACATTA 201 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||||| | || ||||| | ||| || ||||| || |||| |||||| || Sbjct 200 TCTATGGTGTCCGAGCTTTCAACCTCGAGGGTGATGGTCTTCCCTGTCAAAGTCTTGACG 141 Query 45326 AAGATTTGCAT 45336 || || ||||| Sbjct 140 AATATCTGCAT 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393208943029474