Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq270 93.3 4e-14 >seq270 Length=105985 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 11624 ATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAAT 11683 || ||||| ||||||||||| ||||| ||||||||||| ||| || || || || || Sbjct 91786 ATCAAACAAGCAAAATCACAGTGTAAGCCTTCGTCTCTGGATATAAGCTCGTTGGAGAAG 91845 Query 11684 GTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA-AATGAACCAGA 11742 || ||||| ||||||| || |||||||||| ||| |||| || ||| || || || Sbjct 91846 GTCAATCCTGGCATCAGACCGCGTTTTTTTAGCCAGAATACGGC-GCAGAAGCTTCCGGA 91904 Query 11743 AAAGAATATTCCCTCCAC 11760 ||||| || || ||||| Sbjct 91905 GAAGAAGATGCCTTCCAC 91922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466254832483360