Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq270 127 3e-24
>seq270
Length=105985
Score = 127 bits (140), Expect = 3e-24
Identities = 381/569 (67%), Gaps = 33/569 (6%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||||| |||||||| || || | |||||||| ||||| | ||| |||||||||||
Sbjct 92345 ATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTTCTGGACCGCCGAGGAGGTCGATCTA 92286
Query 125079 TCCAAGGACCTGTACG--ATTGGGAG---ACTCGTTTGACTGAAACTGAGCGAGAGTTTA 125133
| | || | | || | |||||| |||| || || ||| | | || |
Sbjct 92285 ACTCAAGA--TATCCGTCACTGGGAGGAAACTCTAACCACCGAC---GAGAAACATTTCA 92231
Query 125134 TATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGA 125193
| || ||| | | |||||||| |||| |||||| |||||||| ||| || ||
Sbjct 92230 TCTCTCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGAATCGTTCTCGAGAACCTCGCCG 92171
Query 125194 CACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTCCAAA 125250
| | ||| | || | ||| || | |||| ||| || || || || ||||| |
Sbjct 92170 GAAGGTTCATGAATGATAT--CCAGGTCTCCGAGGC-TCGCGCCTTCTATGGTTTCCAGA 92114
Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310
|| |||||||| | || || || |||||| || ||| | | | ||||| |
Sbjct 92113 TCGCAGTTGAGAACATCCATTCTGAGATGTACAGCCTCCTCATTCAAACGCTAATTCGGG 92054
Query 125311 A-TCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACACGGT----GCCGTCTATAC 125364
| |||| ||| || ||| ||||| ||||||| ||||| | |||||| ||
Sbjct 92053 ACTCCG--ACGAGAAGCACCGCCTCTTCCACGCAATTGACACCATCCCTGCCGTC---AC 91999
Query 125365 GTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACA 125424
|| ||||| || |||| | || ||||||||| | | | || | ||||||
Sbjct 91998 A-AAGAAGGCGCAGTGGGCCTTGCGATGGATCGATTCCTCCGAATCCTT---CGCCGAGC 91943
Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG-TTTTGCGGCCATC 125483
|| | || || ||||| ||| || ||||||||||| || || || || ||| ||| |
Sbjct 91942 GAATCGTCGCTTTCGCTTGCGTGGAAGGCATCTTCTTCTCCGGAAGCTTCTGC-GCCGTA 91884
Query 125484 TTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCT 125543
|| ||||| || || ||||| || ||||| ||| |||| | |||||| |||||||
Sbjct 91883 TTCTGGCTAAAAAAACGCGGTCTGATGCCAGGATTGACCTTCTCCAACGAGCTTATATCC 91824
Query 125544 CGAGACGAGGGCCTACACTGTGACTTTGC 125572
||||||| ||| |||||||||| |||||
Sbjct 91823 AGAGACGAAGGCTTACACTGTGATTTTGC 91795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 737468823755440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |