Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07] 387,594 sequences; 1,177,687,305 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq153 132 6e-26 >seq153 Length=120312 Score = 132 bits (146), Expect = 6e-26 Identities = 434/666 (65%), Gaps = 24/666 (4%) Strand=Plus/Minus Query 164433 AGAATTTTCTCTTATTTTCAGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAAT 164492 ||||||| || |||||| ||| |||| ||||||||||| | ||| | | | Sbjct 98188 AGAATTTGCTGATATTTTTAGAAGAGCCTTTGCTTCTAGGGTTTTCCCTCCTCATGTGAC 98129 Query 164493 aaaaaaaTTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGG 164552 || || || || || ||| | ||||| || | | |||| ||||||||| || Sbjct 98128 AAGTAAGTTGGGAATAAAGCATGTCAAAGGTATGCTTCTCTATGGGCCTCCTGGTACTGG 98069 Query 164553 TAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAAT 164609 ||||| | |||||||| |||| || | || ||| | ||||| ||||| Sbjct 98068 AAAAACTCTGGTGGCTCGACAAATTGGGAAAA-TGTTGAATGGAAAGGACCCA--AAAAT 98012 Query 164610 TGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAA 164669 ||| |||||||||||| | |||| ||| | ||| |||||| | ||| ||||| || | Sbjct 98011 TGTGAATGGTCCTGAAGTCTTGAGCAAGTTTGTTGGTGAGACTGAAAAGAATGTGAGGGA 97952 Query 164670 GTTGTTTCAGGAGGCTGAAGAAGAACAAAAGA--AAGCAGGTTTAGCTAGTAAATTACAT 164727 ||||| || ||||| |||| |||| || | | || | || ||| | | ||| Sbjct 97951 TCTGTTTGCTGATGCTGAGCAAGACCAAAGGACTAGGGGGGATGAG--AGTGATCTCCAT 97894 Query 164728 GTTATTGTTTTTGATGAGATAGATGCTCTTTGCAA---AA-------AAC--GTGGTGAT 164775 ||||| |||||||||| || ||||| ||||||| || ||| | | || Sbjct 97893 GTTATCATTTTTGATGAAATTGATGCAATTTGCAAGGCAAGGGGTTCAACTAGGGATGGG 97834 Query 164776 AATATTATTCATGAT-GCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATC 164834 | | |||||||| ||| | || || ||| |||| | || || |||||||| || | Sbjct 97833 ACTGGAGTTCATGATAGCA-TTGTCAACCAGCTGCTCACAAAGATTGATGGTGTGGAGGC 97775 Query 164835 CTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTT 164894 | ||||| |||| || | |||||||||||| || ||||| ||||||| || | Sbjct 97774 ACTCAATAACGTTTTGCTTATTGGTATGACCAACAGAAAGGATTTGCTTGATGAAGCACT 97715 Query 164895 ATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACG 164954 | ||||||| || | ||| | || | || || ||| |||| | | ||||| || Sbjct 97714 CCTCAGACCTGGACGTCTTGAAGTTCAAGTTGAGATTGGACTACCTAATGAGGAAGGTCG 97655 Query 164955 CCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGAAATCCTGTGATATATTATCTCCCGA 165014 | || ||| | || |||| | ||||||||| | | | |||| || Sbjct 97654 TTTGCAGATTCTCGAAATTCACACGAACAAAATGAAAGAAAATTCGTTTCTTGCTCCAGA 97595 Query 165015 TGTAGATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGG 165074 ||| |||| || || | ||||| |||| || || || ||||| || ||| | || || Sbjct 97594 TGTGAATTTGAAAGAACTTGCTGCAAAAACAAAGAACTACAGTGGAGCAGAACTTGAAGG 97535 Query 165075 ATTAGT 165080 |||| Sbjct 97534 TGTAGT 97529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592985044850400