Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_006820.1
Length=196280
Score E
Sequences producing significant alignments: (Bits) Value
seq5412 448 6e-121
seq29420 264 1e-65
seq25216 221 2e-52
seq8546 199 5e-46
seq59 179 5e-40
seq8630 111 2e-19
seq3927 107 2e-18
seq4835 91.5 2e-13
seq1564 82.4 1e-10
>seq5412
Length=31808
Score = 448 bits (496), Expect = 6e-121
Identities = 515/685 (75%), Gaps = 16/685 (2%)
Strand=Plus/Minus
Query 135432 TGATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGC 135489
||||||||||||| ||| | | | || | ||| | |||||| | || ||||| |||||
Sbjct 15271 TGATGATTCCTAC-CTTATTGACCGCAAC-ATCCGTATTTATTATAGCCTTCATTGCTGC 15214
Query 135490 ACCTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAA 135549
||||| || |||||||| || || || ||||||||| ||| ||||| | ||||||||
Sbjct 15213 TCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTTTGGATCTCTTCTTTACGGAAA 15154
Query 135550 TAACATCATCTCTGGTGCTGTTATCC---CTTCTAGCAACGCCATCGGCCTTCACTTCTA 135606
|| || ||||||||||| |||| | ||| | || || || || | ||||| ||
Sbjct 15153 CAATATTATCTCTGGTGCCATTATTCAGACTTTT-GCT--GCTATAGGTTTGCACTTTTA 15097
Query 135607 TCCCATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACT 135666
||| || ||||||||||| ||| ||||||| ||| |||| ||||||||||| ||| | ||
Sbjct 15096 TCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCATATGAGCT 15037
Query 135667 AGTGGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTC 135726
| | || || |||||| | | ||||| | |||||||||||| |||||||||||
Sbjct 15036 AATTGTTTTTCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 14977
Query 135727 TTACCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGC 135786
|| ||| ||||||||||||||||||||| ||| || || |||||||||||||| ||||
Sbjct 14976 TTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCGTATTCAGCCCCTGTTGCGACTGC 14917
Query 135787 TACTGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCT 135846
||||||||||||| || ||||||| |||| |||| || | |||||||||| ||
Sbjct 14916 TACTGCTGTTTTCTTGATCTACCCAATTGGTTAAGGAAGCTTTTCTAATGGTATGCCTCT 14857
Query 135847 TGGCATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCAT 135906
|| |||||||| ||||| |||| |||| |||| |||||||| || |||||||| || ||
Sbjct 14856 AGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 14797
Query 135907 GCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTAT 135966
||| || || |||||||| || || ||||| || |||| || | || ||| |
Sbjct 14796 GCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGACGGCTACCTATTC------AG 14743
Query 135967 GCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAA 136026
|||||| ||| | || ||||| ||| | | | || || || || ||||| ||
Sbjct 14742 GCATGGTTCTTTGGTAACCTCGAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAA 14683
Query 136027 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTA 136086
| ||||||| | | |||||||| ||||||||||| || || || ||||||||||||||
Sbjct 14682 TGAAGGTTACAGGCTTGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCTCATGGTTA 14623
Query 136087 CTTCGGTCGTCTGATCTTCCAATAT 136111
|| || || | ||||||||||||
Sbjct 14622 TTTTGGCCGATTAATCTTCCAATAT 14598
>seq29420
Length=7120
Score = 264 bits (292), Expect = 1e-65
Identities = 278/363 (77%), Gaps = 6/363 (2%)
Strand=Plus/Plus
Query 135487 TGCACCTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGG 135546
||| ||||| || |||||||| || || || ||||||||| |||| ||||| | ||||
Sbjct 3415 TGCTCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTCACGG 3474
Query 135547 AAATAACATCATCTCTGGTGCTGTTATCCC---TTCTAGCAACGCCATCGGCCTTCACTT 135603
||| || || |||||||||| |||| || |||| || || || || | |||||
Sbjct 3475 AAACAATATTATCTCTGGTGACATTATTCCGACTTCT-GCT--GCTATAGGTTTGCACTT 3531
Query 135604 CTATCCCATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCA 135663
||||| || ||||||||||| ||| ||||||| ||| |||| ||||||||||||||| |
Sbjct 3532 TTATCCAATATGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 3591
Query 135664 ACTAGTGGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACT 135723
||| || || |||||| | | ||||| | |||||||||||| |||||||||||
Sbjct 3592 GCTAAATGTTTTGCACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 3651
Query 135724 CTCTTACCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGC 135783
|| ||| ||||||||||||||||||||| ||| || || |||| |||||||| ||
Sbjct 3652 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGTTCCTGTTGCGGC 3711
Query 135784 TGCTACTGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCC 135843
||||||| || ||||| || ||||||| |||| ||||| || ||||||||||||
Sbjct 3712 TGCTACTACTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCC 3771
Query 135844 GCT 135846
||
Sbjct 3772 TCT 3774
>seq25216
Length=8180
Score = 221 bits (244), Expect = 2e-52
Identities = 202/255 (79%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 135737 GGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTT 135796
|||||||||||||||||| | | || || ||||| |||||||| |||||||||||||||
Sbjct 7253 GGTATGCGCCCTTGGATTGCTATTGCGTATTCAGCTCCTGTTGCGGCTGCTACTGCTGTT 7194
Query 135797 TTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCT 135856
||| || ||||||| |||| ||||| || |||||||||||| || || ||||||
Sbjct 7193 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCT 7134
Query 135857 GGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTC 135916
|| ||||| |||| |||| |||| |||||| | || |||||||| || ||||| || ||
Sbjct 7133 GGTACTTTCAACTTCATGATTGTATTCCAGTCTGAGCACAACATCCTTATGCACCCATTT 7074
Query 135917 CACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCT 135976
|||||||| || || | ||| || ||||| || || || ||| |||||||||||| |||
Sbjct 7073 CACATGTTAGGCGTAGATGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCT 7014
Query 135977 CTTGTCACCTCTAGT 135991
| || ||||| |||
Sbjct 7013 TTGGTAACCTCGAGT 6999
>seq8546
Length=31398
Score = 199 bits (220), Expect = 5e-46
Identities = 291/411 (71%), Gaps = 4/411 (1%)
Strand=Plus/Minus
Query 135917 CACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCT 135976
|||||||| || || ||||| || ||||| || || | ||| || ||||||||| |||
Sbjct 13204 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCATATTCAGTGTTATGCATGGTTCT 13145
Query 135977 CTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTAC 136036
| || ||||||||| | | | || || || || ||||| || | ||||||
Sbjct 13144 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATAAATCCGCTAATGAAGGTTAC 13085
Query 136037 AAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGT 136096
| || |||||||| || || ||| | || ||||| |||||||||||||| || || ||
Sbjct 13084 AGATTTGGTCAAGAGGAGGAAACTAAGAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 13025
Query 136097 CTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCT 136156
| |||||||||||||| |||||| | |||| ||| |||| || ||| | | ||||
Sbjct 13024 TTCATCTTCCAATATGCTAGTTTCAACGATTCTCATTCTTTACATTTCTTCTTAGTTGCT 12965
Query 136157 TGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTC 136216
|||||||| || ||||| |||||| || | | || | ||| ||||| || | |||
Sbjct 12964 TGGCCTGTAGTAGGTATATGGTTTACTACTTTAGGTATTAGTACTATGGCATTTATCCTA 12905
Query 136217 AATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGG 136276
|| || ||||| |||||||| || | || | | ||||||||||| | | |||
Sbjct 12904 AACGGCTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA----TTGG 12849
Query 136277 GCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327
|| ||| | | || || ||| || |||||||| || ||||| || |||
Sbjct 12848 GCCGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 12798
>seq59
Length=339703
Score = 179 bits (198), Expect = 5e-40
Identities = 192/254 (76%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 135832 TGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGA 135891
|||||||||||| || || ||||||| ||||| |||| |||| |||| ||||| || ||
Sbjct 52314 TGATGGTATGCCTCTAGGAGTTTCTGGTACTTTCAACTTCATGATTGTATTCCATGCTGA 52373
Query 135892 ACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTC 135951
|||||||| || ||||| || || |||||||| | || ||||| || ||||| || ||
Sbjct 52374 GCACAACATCCTTATGCACCCATTTCACATGTTAAGCGTAGCTGGTGTATTCGGCGGCTC 52433
Query 135952 TCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGA 136011
|| ||| || ||||||||| ||| | || ||||| ||| | | | || || || ||
Sbjct 52434 CCTATTCAGTGTTATGCATGGTTCTTTGGTAACCTCGAGTTTGATTAGGGAAACCACAGA 52493
Query 136012 GGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGT 136071
||||| || | ||||||| ||| |||||||| ||||||||||| || |||||
Sbjct 52494 AAATGAATCTACTAATGAAGGTTACAGGTTTGGTCAAGAGGAAGAGACTTATAATATTGT 52553
Query 136072 TGCTGCTCATGGTT 136085
||| |||||||||
Sbjct 52554 AGCTACTCATGGTT 52567
>seq8630
Length=23577
Score = 111 bits (122), Expect = 2e-19
Identities = 105/133 (79%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 136031 GGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTT-GCTGCTCATGGTTACTT 136089
|||||||| || |||||||| || || ||||| || || || |||||||||||||| ||
Sbjct 7497 GGTTACAAATTTGGTCAAGAGGAGGAAACTTAGAATATCGTACGCTGCTCATGGTTATTT 7556
Query 136090 CGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCT 136149
||||| | |||||||||||||| |||||||| |||||||| |||| || || |
Sbjct 7557 TGGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTATT 7616
Query 136150 TGCTGCTTGGCCT 136162
|| |||||||||
Sbjct 7617 AGCCGCTTGGCCT 7629
>seq3927
Length=49767
Score = 107 bits (118), Expect = 2e-18
Identities = 175/248 (71%), Gaps = 7/248 (3%)
Strand=Plus/Plus
Query 138153 TGGACTTTTGTGGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTT 138212
||||||||||| || ||||| || || ||| | || || || || ||| | || || |||
Sbjct 26007 TGGACTTTTGTTGCTCTCCATGGCGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTT 26066
Query 138213 GAGATCTCTCG-TCTGGTAGGCA--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCC 138269
|| | |||| |||| | || | || || || || ||||| ||||| | ||||||
Sbjct 26067 GAACTTGCTCGATCTGTT---CAATTGCGACCTTATAATGCAATAGCATTATTTGGTCCA 26123
Query 138270 ATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTT 138329
|| || | || || ||||| || || ||||| | ||||| || |||||||||||
Sbjct 26124 ATTGCCATTTTTGTTTCGGTGTTTCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTT 26183
Query 138330 GCTCCCTCCTTTGGTGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCAT 138389
|| || |||||||| ||| | || || |||||| | | || |||| || || |||
Sbjct 26184 GCGCCTAGTTTTGGTGTAGCATCTATATT-CGATTCATCCTCTTTTTTCAAGGGTTTCAT 26242
Query 138390 AACTGGAC 138397
|| |||||
Sbjct 26243 AATTGGAC 26250
>seq4835
Length=43218
Score = 91.5 bits (100), Expect = 2e-13
Identities = 102/136 (75%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 136031 GGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTC 136090
||||||| || |||||||| || || ||||| || || || |||||||||||||| ||
Sbjct 9059 GGTTACAGATTTGGTCAAGAGGAGGAAACTTAGAATATCGTAGCTGCTCATGGTTATTTT 9118
Query 136091 GGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTC----GCTACACTTTTT 136146
|| | | |||||||||||||| |||||||| |||||||| |||| || ||
Sbjct 9119 GGCAGATTCATCTTCCAATATGCTAGTTTCAACAAATCTCGTTCTTTAATTACATTTCTT 9178
Query 136147 CCTTGCTGCTTGGCCT 136162
| || |||||||||
Sbjct 9179 ATTAGCCGCTTGGCCT 9194
>seq1564
Length=57605
Score = 82.4 bits (90), Expect = 1e-10
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 135740 ATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTC 135799
||||||||||||||| ||| || || ||||| ||| |||| |||||||||||| |||||
Sbjct 41602 ATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTATTGCGGCTGCTACTGCTATTTTC 41661
Query 135800 CTGGTCTACCCCTTTGGACAAGG 135822
|| ||||||| ||| |||||
Sbjct 41662 TTGATCTACCCAATTGTTCAAGG 41684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 624925542137600
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