Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq48644 141 9e-29
seq45117 141 9e-29
seq184 131 2e-25
seq35801 95.1 1e-14
seq4209 93.3 4e-14
seq1982 93.3 4e-14
seq22012 89.7 5e-13
seq10588 89.7 5e-13
seq9434 89.7 5e-13
seq87 89.7 5e-13
seq1077 82.4 7e-11
>seq48644
Length=2856
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| ||||| | || | ||| |||||||||||||||||||| |||
Sbjct 1833 GCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGC 1892
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||||||||| ||||| ||| |||| | ||||||||||||||| ||
Sbjct 1893 GAGGGTACGACCGTCCTCTAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 1952
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| ||||| ||||| ||| ||| || | | || | || |||| || || |
Sbjct 1953 GATGCCTTCCTTGTCCTGGATCTTCGCTTTCACATTGTCGATGGTGTCGGAAGATTCAAC 2012
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || |||||||| ||||| || || ||||||||
Sbjct 2013 CTCTAGGGTTATCGTCTTCCCGGTTAGTGTTTTCACAAAGATCTGCAT 2060
>seq45117
Length=3449
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| ||||| | || | ||| |||||||||||||||||||| |||
Sbjct 2426 GCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGC 2485
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||||||||| ||||| ||| |||| | ||||||||||||||| ||
Sbjct 2486 GAGGGTACGACCGTCCTCTAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 2545
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| ||||| ||||| ||| ||| || | | || | || |||| || || |
Sbjct 2546 GATGCCTTCCTTGTCCTGGATCTTCGCTTTCACATTGTCGATGGTGTCGGAAGATTCAAC 2605
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || |||||||| ||||| || || ||||||||
Sbjct 2606 CTCTAGGGTTATCGTCTTCCCGGTTAGTGTTTTCACAAAGATCTGCAT 2653
>seq184
Length=120086
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | || | ||||| ||||| || || |||||||||
Sbjct 5453 CCACCACGAAGACGAAGCACCAGGTGGAGCGTCGATTCCTTCTGGATATTGTAATCGGCG 5394
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||||||||||| || ||| |||||| || |||||||| || ||
Sbjct 5393 AGGGTTCGGCCATCCTCTAGCTGCTTACCGGCGAAGATTAGCCGTTGCTGGTCTGGTGGA 5334
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| ||||| ||| || ||| | | || | || |||| ||| ||||
Sbjct 5333 ATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCGGAGGATTCGACC 5274
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || ||||| || || ||||| ||||||||||||||
Sbjct 5273 TCGAGGGTTATCGTCTTACCCGTCAGGGTTTTGACGAAAATCTGCAT 5227
>seq35801
Length=5147
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | |||||| ||||| |||||||||||||| |
Sbjct 356 CCACCACGGAGACGAAGAACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAATCAGCC 297
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || || |||| || | ||||||||| || ||
Sbjct 296 AATGTCCGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGCGGA 237
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | || || | | || |
Sbjct 236 ATCCCCTCCTTGTCCTGAATCTTCGCCTTGACATTATCTATGGTGTCCGAGCTTTCAACC 177
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || | ||| || ||||| ||||||||
Sbjct 176 TCGAGGGTGATGGTCTTCCCTGTCAAAGTCTTGACGAATATCTGCAT 130
>seq4209
Length=73032
Score = 93.3 bits (102), Expect = 4e-14
Identities = 178/261 (68%), Gaps = 1/261 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | || | || |||||||| || ||||| || ||
Sbjct 6 GCCACCACGAAGACGGAGAACCAGGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCAGC 65
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| | ||||| ||||||||||| || |||| | |||||||||||| || ||
Sbjct 66 AAGGGTTCTACCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGGTCTGGTGG 125
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| ||||| ||||| ||| || ||||| | || | || || | | ||| |
Sbjct 126 GATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCAAC 185
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATTTTAT 131246
|| | ||| | ||| || ||||| | ||||| || || |||||||| ||| || |
Sbjct 186 CTCTAGGGTTATGGTCTTTCCGGTCAATGTTTTCACAAAGATCTGCATCTGTTAATTCAG 245
Query 131247 TCCTTCCTCTTAATAATCTTG 131267
|||| | | | ||||||||
Sbjct 246 AACTTCAT-TCATTAATCTTG 265
>seq1982
Length=56187
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138
||| || |||||||| || ||| |||| | |||||||||||||| |||||||| || ||
Sbjct 32274 GTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTT 32215
Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198
||| ||| || ||| | | || | || |||| |||||| | |||| ||| |
Sbjct 32214 GTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTTAT 32155
Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || || ||||| ||||| ||||||||
Sbjct 32154 CGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 32119
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||| ||||| || |||||||| |||
Sbjct 32417 CCACCACGAAGACGAAGCACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCA 32358
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || |||||||| || ||| |||| | |||||||||||||| |||
Sbjct 32357 AGAGTACGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGG 32298
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 32297 ATTCCCTCCTTGTC 32284
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138
||| || |||||||| || ||| |||| | |||||||||||||| |||||||| || ||
Sbjct 21937 GTCTTCGAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTT 21878
Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198
||| || || ||| | | || | || |||| ||||| | |||| ||| |
Sbjct 21877 GTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTAT 21818
Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || |||| ||||| ||||| ||||||||
Sbjct 21817 CGTCTTCCCCGTTAAGGTTTTCACGAAGATCTGCAT 21782
>seq22012
Length=9549
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||| || ||||| |||||||||||||| |
Sbjct 5841 CCACCACGGAGACGAAGAACAAGGTGAAGGGTTGATTCCTTCTGAATGTTGTAATCAGCC 5900
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || || |||| || | ||||||||| || ||
Sbjct 5901 AATGTCCGTCCATCCTCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGA 5960
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | || || | | || |
Sbjct 5961 ATCCCCTCCTTGTCCTGAATCTTCGCCTTGACATTATCTATGGTGTCCGAGCTTTCAACC 6020
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || || |||| ||| || ||||| ||||||||
Sbjct 6021 TCGAGGGTGATAGTCTTCCCTGTTAAAGTCTTAACGAATATCTGCAT 6067
>seq10588
Length=20159
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066
||||| |||| ||| ||||| | ||| | ||| |||||||| || || |||||||| |||
Sbjct 1253 CCACCACGCAGACGAAGCACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCT 1312
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| | ||||| |||||||| || || |||| | | |||||||||||| ||
Sbjct 1313 -AGGGTTCTTCCATCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGG 1371
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| || ||| | | || | || |||| | ||| |
Sbjct 1372 AATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAAC 1431
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || || || ||||||||
Sbjct 1432 CTCCAAGGTGATAGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 1479
>seq9434
Length=50679
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066
||||| || | ||| || || | || | ||| |||||||| |||||||| ||||| |||
Sbjct 44711 CCACCTCGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTATAATCAGCT 44770
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| ||||| || ||||| || || |||| | |||||||||||| |||||
Sbjct 44771 -AGAGTGCGGCCATCCTCCAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 44829
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||||| ||| | | || | ||||| | | || |
Sbjct 44830 AATCCCTTCCTTGTCCTGAATTTTAGCCTTAACATTGTCGATTGTATCAGAGCTTTCAAC 44889
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | |||||| || || | || || || || || |||||
Sbjct 44890 CTCCAAGGTGATGGTTTTTCCAGTCAATGTCTTCACAAATATTTGCAT 44937
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066
||||| |||| || || || | ||| | || |||||||| || || ||||| || |||
Sbjct 44939 CCACCACGCAGGCGAAGGACCAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCT 44998
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| | ||| || || || ||||| || || |||| | | |||||||| || ||
Sbjct 44999 AGTG-TACGCCCATCTTCGAGTTGCTTCCCGGCAAAGATGAGTCTTTGCTGGTCAGGTGG 45057
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| |||||||| || |||||| ||||| | || | ||| || | |||||
Sbjct 45058 GATACCTTCTTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCTGAACTCTCGAC 45117
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | |||||| || || || ||||| || |||||||||||
Sbjct 45118 CTCAAGAGTTATGGTTTTCCCAGTCAGGGTTTTAACAAAAATCTGCAT 45165
>seq87
Length=177581
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||| | ||| ||||| || || ||||| |||||
Sbjct 54895 CCACCACGAAGACGAAGAACCAAATGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCA 54954
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| | || || || |||||||| || |||| || | ||||||||| || |||
Sbjct 54955 AGGGTCCTTCCATCTTCGAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGG 55014
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||||| || || || ||| | | |||| || | || | || || | | ||| |
Sbjct 55015 ATTCCCTCCTTATCT-TGAATCTTAGCTTTGACGTTGTCAATTGTGTCAGAGCTCTCAAC 55073
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || || ||||| ||||||||||||||
Sbjct 55074 TTCCAACGTAATGGTCTTTCCCGTAAGGGTTTTGACGAAAATCTGCAT 55121
>seq1077
Length=76872
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/134 (74%), Gaps = 3/134 (2%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| | ||| | ||| || ||||||||||| |||| |||||| |||
Sbjct 52849 CCACCACGAAGACGGATCACCAGATGAATCGTCGACTCCTTCTGAACGTTGTAGTCGGCG 52790
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || ||||| || || ||||| |||| | |||||||||| | |||
Sbjct 52789 AGCGTACG---GTCTTCAAGCTGTTTTCCAGCGTATATTATCCTCTGCTGGTCCAGTGGG 52733
Query 131128 ATTCCTTCTTTGTC 131141
| ||||| |||||
Sbjct 52732 ACGCCTTCCTTGTC 52719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 469725933384960
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