Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq4197 116 8e-21
>seq4197
Length=36674
Score = 116 bits (128), Expect = 8e-21
Identities = 355/549 (65%), Gaps = 0/549 (0%)
Strand=Plus/Minus
Query 243207 GCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAA 243266
||| ||| |||||||||| | |||| || || || || || | ||||| |
Sbjct 23662 GCTCTTCCACGCCATCGATACTGTTCCCGCTGTCACCAAGAAAGCCGACTGGGCGCTCCG 23603
Query 243267 GTGGCTAGAACCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGG 243326
||| | || ||| |||| || |||||||| | || || | | |||||||||||
Sbjct 23602 CTGGATTGATTCCGCAGAATCCTTCGCTGAGCGCATAGTTGCTTTTGCCTGCGTTGAAGG 23543
Query 243327 TATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCC 243386
||| | || || || || |||||||| || |||||||| || ||| |||||||
Sbjct 23542 TATCTTCTTCTCTGGAAGCTTCTGCGCGATATTTTGGCTAAAAAAGCGAGGACTGATGCC 23483
Query 243387 TGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGG 243446
||| || | || |||||||| ||| |||||||| ||| | ||| | ||||
Sbjct 23482 TGGACTAACCTTCTCGAACGAGTTGATCTCCCGCGACGAAGGCTTGCACTGCGATTTCGC 23423
Query 243447 TGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCAT 243506
| || || ||| || ||||||||| || ||| ||| || ||| |
Sbjct 23422 TTGTCTCATCTATGAGTTACTGAGGAACAAGCTTCCGGAGGAACGGGTTCAAGGAATAGT 23363
Query 243507 CACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTAT 243566
| ||||| || || | || | ||| ||| | |||||||| | || ||| | | ||
Sbjct 23362 AAAGGAAGCGGTGGAGATAGAGAGGGAGTTCGTGTGCGACGCGCTGCCCTGCGCGTTGAT 23303
Query 243567 TGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCAT 243626
|| |||||| || |||||| | || ||||| || || || || || | || |
Sbjct 23302 AGGGATGAACGGTGTGCTCATGAGCCAATACATAGAGTTTGTGGCGGATAGGCTTCTGGC 23243
Query 243627 CGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCAT 243686
||||| || | || ||| |||||| ||||| |||| | |||||||||||
Sbjct 23242 TGCGCTAGGATGTGGGAAGGTGTACGGTGTGTCAAACCCATTTGATTGGATGGAGCTCAT 23183
Query 243687 TTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGG 243746
|| | || ||||| | || ||||| || ||| | || | ||||| || ||
Sbjct 23182 CTCCTTGCAGGGGAAGGCCAATTTCTTTGAGAAGAGAGTTGGGGATTACCAGAAGGCTTC 23123
Query 243747 TGTGATGAA 243755
|||||||||
Sbjct 23122 TGTGATGAA 23114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1097403044843900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |