Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4197 98.7 1e-15
seq270 91.5 2e-13
>seq4197
Length=36674
Score = 98.7 bits (108), Expect = 1e-15
Identities = 304/462 (66%), Gaps = 24/462 (5%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| |||||||| | |||||| ||||| || | |||||| | |||| ||| ||||||
Sbjct 23134 GTAATCCCCAACTCTCTTCTCAAAGAAATTGGCCTTCCCCTGCAAGGAGATGAGCTCCAT 23193
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC---CCA-ATCTGTTTG---- 125869
||||||||||||| ||| || | || |||| ||| ||| |
Sbjct 23194 CCAATCAAATGGGTT---TGA----CACACCGTA--CACCTTCCCACATCCTAGCGCAGC 23244
Query 125870 -AGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928
|| || | ||||| || |||| ||||| | ||| | || |||||| || ||
Sbjct 23245 CAGAAGCCTATCCGCCACAAACTCTATGTATTGGCTCATGAGCACACCGTTCATCCCTAT 23304
Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988
| || || |||||||| | | |||| || |||| || ||||| |||||| ||
Sbjct 23305 CAACGCGCAGGGCAGCGCGTCGCACACGAACTCCCTCTCTATCTCCACCGCTTCCTTTAC 23364
Query 125989 GATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCA--AAGTCTT-GAAGAGTTCCAC 126045
|| | |||| ||| || | | | || | || || || | || ||| ||
Sbjct 23365 TATTCCTTGAACCCGTTCCTCCGGAAGCTTGTTCCTCAGTAACTCATAGATGAGA--CAA 23422
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
| ||| || ||| | || ||||| |||||||| | || ||||||||| |||||
Sbjct 23423 GCGAAA-TCGCAGTGCAAGCCTTCGTCGCGGGAGATCAACTCGTTCGAGAAGGTTAGTCC 23481
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||| || || ||||| || | ||| || ||||| || || || |||||||||||
Sbjct 23482 AGGCATCAGTCCTCGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCAGAGAAGAAGAT 23541
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207
|| || || || || || |||| | |||||||| |||||
Sbjct 23542 ACCTTCAACGCAGGCAAAAGCAACTATGCGCTCAGCGAAGGA 23583
>seq270
Length=105985
Score = 91.5 bits (100), Expect = 2e-13
Identities = 297/454 (65%), Gaps = 8/454 (2%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| | |||||| ||||| || |||||||| | || |||| |||||
Sbjct 91506 GTAGTCGCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAATGAGATAAGATCCAT 91565
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCAC-CCCAATCTGTTTGAGGAGAC 125876
||||||| ||||| | | | | || ||| ||||| | | || |
Sbjct 91566 CCAATCAAACGGGTTGGGT-ACACCGTACACCTTCCCACACCCAAGCGCAACCAACAGCC 91624
Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATC--TTCTCAGAGTTCATACCGATGAGGTT 125934
||| | || |||||||||||||| |||| || || ||||| || || |
Sbjct 91625 TATCAGCTACAAACTCAATGTACTCACTCATCAGTTTTCCA--TTCATCCCAATCAACGC 91682
Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994
||||| |||||||| | || ||| ||||||| || ||||| || || | |||||| |
Sbjct 91683 GCATGGCAGCGCGTCACAAATAAACTCCTTCTCGATCTCCACCGCATCTCTCACGATCCC 91742
Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG-GCAAACT 126053
| | ||| | | | | || || | | | ||| | || ||||| |
Sbjct 91743 TTTTACTCGGTCTTCAGGAAGCTTCTTCTTCAGGATTTCGTAGA-TCAAACAAGCAAAAT 91801
Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113
| ||| | || ||||| | ||| || || || || |||||| || ||||||||| |
Sbjct 91802 CACAGTGTAAGCCTTCGTCTCTGGATATAAGCTCGTTGGAGAAGGTCAATCCTGGCATCA 91861
Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173
|||| || || || | |||||| | || || || || ||||||||||| || ||||
Sbjct 91862 GACCGCGTTTTTTTAGCCAGAATACGGCGCAGAAGCTTCCGGAGAAGAAGATGCCTTCCA 91921
Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207
| || ||||| || | || ||||| || |||||
Sbjct 91922 CGCAAGCGAAAGCGACGATTCGCTCGGCGAAGGA 91955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594459466609520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |