Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq87 84.2 2e-11
>seq87
Length=177581
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || | || ||| || ||||| || | ||| ||| || || ||||||||||| ||
Sbjct 55351 CCACCCCTCAGACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTATAATCTGCA 55410
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| |||||||| |||||| |||| || | | ||| || || | |||
Sbjct 55411 AGTGTGCGACCATCTTCCAATTGCTTCCCGGCAAAGATGAGCCTCTGTTGGTCAGGGGGA 55470
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCAC 39671
| |||||| ||||| ||| || || | ||| | | | |||||| | ||| || ||
Sbjct 55471 ATGCCTTCCTTGTCCTGTATCTTAGCCTTTA-CGTTGTCAATTGTGTCGGAGCTCTCAAC 55529
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || || || || |||| || || || ||||| |||||
Sbjct 55530 TTCGAGGGTGATCGTCTTGCCAGTTAGGGTCTTGACAAAGATTTGCAT 55577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345728694832202
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |